Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCDNQ9UBB6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
NCDNQ9UBB6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.66■■□□□ 1.54
NCDNQ9UBB6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCDNQ9UBB6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NCDNQ9UBB6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCDNQ9UBB6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.64■■□□□ 1.54
NCDNQ9UBB6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 KRT125P-201ENST00000546827 989 ntBASIC24.63■■□□□ 1.53
NCDNQ9UBB6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCDNQ9UBB6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NCDNQ9UBB6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NCDNQ9UBB6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NCDNQ9UBB6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NCDNQ9UBB6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.61■■□□□ 1.53
NCDNQ9UBB6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NCDNQ9UBB6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
NCDNQ9UBB6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.6■■□□□ 1.53
NCDNQ9UBB6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.6■■□□□ 1.53
NCDNQ9UBB6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
NCDNQ9UBB6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NCDNQ9UBB6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NCDNQ9UBB6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NCDNQ9UBB6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NCDNQ9UBB6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.58■■□□□ 1.53
NCDNQ9UBB6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
NCDNQ9UBB6 AL139246.5-201ENST00000606645 996 ntBASIC24.58■■□□□ 1.53
NCDNQ9UBB6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
NCDNQ9UBB6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NCDNQ9UBB6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NCDNQ9UBB6 AL135925.1-201ENST00000605920 1701 ntBASIC24.56■■□□□ 1.52
NCDNQ9UBB6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.56■■□□□ 1.52
NCDNQ9UBB6 KRT16P3-201ENST00000439127 1283 ntBASIC24.56■■□□□ 1.52
NCDNQ9UBB6 AC019171.1-201ENST00000601251 1056 ntBASIC24.56■■□□□ 1.52
NCDNQ9UBB6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.56■■□□□ 1.52
NCDNQ9UBB6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NCDNQ9UBB6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NCDNQ9UBB6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
NCDNQ9UBB6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.55■■□□□ 1.52
NCDNQ9UBB6 MIR4787-201ENST00000607364 84 ntBASIC24.55■■□□□ 1.52
NCDNQ9UBB6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NCDNQ9UBB6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
NCDNQ9UBB6 LONRF2P2-201ENST00000439212 571 ntBASIC24.54■■□□□ 1.52
NCDNQ9UBB6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.54■■□□□ 1.52
NCDNQ9UBB6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
NCDNQ9UBB6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.54■■□□□ 1.52
NCDNQ9UBB6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.53■■□□□ 1.52
NCDNQ9UBB6 BX664725.1-201ENST00000438252 379 ntBASIC24.53■■□□□ 1.52
NCDNQ9UBB6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NCDNQ9UBB6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NCDNQ9UBB6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NCDNQ9UBB6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.51■■□□□ 1.51
NCDNQ9UBB6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
NCDNQ9UBB6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCDNQ9UBB6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
NCDNQ9UBB6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NCDNQ9UBB6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
NCDNQ9UBB6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.5■■□□□ 1.51
NCDNQ9UBB6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.49■■□□□ 1.51
NCDNQ9UBB6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.49■■□□□ 1.51
NCDNQ9UBB6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.49■■□□□ 1.51
NCDNQ9UBB6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.49■■□□□ 1.51
NCDNQ9UBB6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NCDNQ9UBB6 UNC93B8-201ENST00000511903 705 ntBASIC24.48■■□□□ 1.51
NCDNQ9UBB6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
NCDNQ9UBB6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.47■■□□□ 1.51
NCDNQ9UBB6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.47■■□□□ 1.51
NCDNQ9UBB6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.47■■□□□ 1.51
NCDNQ9UBB6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCDNQ9UBB6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCDNQ9UBB6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.46■■□□□ 1.51
NCDNQ9UBB6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
NCDNQ9UBB6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.46■■□□□ 1.51
NCDNQ9UBB6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.45■■□□□ 1.5
NCDNQ9UBB6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
NCDNQ9UBB6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NCDNQ9UBB6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms