Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PARPBPQ9NWS1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.84■■□□□ 1.09
PARPBPQ9NWS1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PARPBPQ9NWS1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PARPBPQ9NWS1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PARPBPQ9NWS1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PARPBPQ9NWS1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PARPBPQ9NWS1 AL157400.5-201ENST00000507624 621 ntBASIC21.83■■□□□ 1.09
PARPBPQ9NWS1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PARPBPQ9NWS1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PARPBPQ9NWS1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PARPBPQ9NWS1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PARPBPQ9NWS1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.82■■□□□ 1.08
PARPBPQ9NWS1 SMPD5-203ENST00000639008 1464 ntBASIC21.82■■□□□ 1.08
PARPBPQ9NWS1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PARPBPQ9NWS1 AL359504.2-201ENST00000605506 1601 ntBASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PARPBPQ9NWS1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PARPBPQ9NWS1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PARPBPQ9NWS1 RARRES2P2-201ENST00000394842 485 ntBASIC21.79■■□□□ 1.08
PARPBPQ9NWS1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.79■■□□□ 1.08
PARPBPQ9NWS1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.79■■□□□ 1.08
PARPBPQ9NWS1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 AC142472.1-201ENST00000612013 1741 ntBASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PARPBPQ9NWS1 AP004609.3-201ENST00000610705 1884 ntBASIC21.77■■□□□ 1.08
PARPBPQ9NWS1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.77■■□□□ 1.08
PARPBPQ9NWS1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.77■■□□□ 1.08
PARPBPQ9NWS1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PARPBPQ9NWS1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PARPBPQ9NWS1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.77■■□□□ 1.07
PARPBPQ9NWS1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 AC025884.2-201ENST00000553429 711 ntBASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PARPBPQ9NWS1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PARPBPQ9NWS1 MIR3960-201ENST00000583311 91 ntBASIC21.75■■□□□ 1.07
PARPBPQ9NWS1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PARPBPQ9NWS1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PARPBPQ9NWS1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.74■■□□□ 1.07
PARPBPQ9NWS1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PARPBPQ9NWS1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PARPBPQ9NWS1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.73■■□□□ 1.07
PARPBPQ9NWS1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PARPBPQ9NWS1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.73■■□□□ 1.07
PARPBPQ9NWS1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PARPBPQ9NWS1 AC135731.1-201ENST00000569415 2548 ntBASIC21.73■■□□□ 1.07
PARPBPQ9NWS1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PARPBPQ9NWS1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 AC007029.1-201ENST00000604183 313 ntBASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PARPBPQ9NWS1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PARPBPQ9NWS1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.7■■□□□ 1.06
PARPBPQ9NWS1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
PARPBPQ9NWS1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PARPBPQ9NWS1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 RP9P-202ENST00000450133 1212 ntBASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PARPBPQ9NWS1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms