Protein–RNA interactions for Protein: Q9NV12

TMEM140, Transmembrane protein 140, humanhuman

Predictions only

Length 185 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140Q9NV12 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM140Q9NV12 RPS2P35-201ENST00000443417 897 ntBASIC19.78■□□□□ 0.76
TMEM140Q9NV12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM140Q9NV12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM140Q9NV12 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM140Q9NV12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM140Q9NV12 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM140Q9NV12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L13-201ENST00000554103 1267 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L15-201ENST00000611059 1267 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L23-201ENST00000615195 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L24-201ENST00000617576 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L22-201ENST00000618238 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L20-201ENST00000619712 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L21-201ENST00000622058 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L10-201ENST00000622460 1267 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 DUX4L25-201ENST00000624915 1269 ntBASIC19.75■□□□□ 0.75
TMEM140Q9NV12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM140Q9NV12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM140Q9NV12 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM140Q9NV12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM140Q9NV12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM140Q9NV12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM140Q9NV12 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM140Q9NV12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM140Q9NV12 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM140Q9NV12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMEM140Q9NV12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM140Q9NV12 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 AC008813.1-201ENST00000536597 885 ntBASIC19.72■□□□□ 0.75
TMEM140Q9NV12 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TMEM140Q9NV12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TMEM140Q9NV12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.7■□□□□ 0.74
TMEM140Q9NV12 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM140Q9NV12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM140Q9NV12 DUX4L11-201ENST00000611504 1267 ntBASIC19.69■□□□□ 0.74
TMEM140Q9NV12 DUX4L12-201ENST00000614593 1267 ntBASIC19.69■□□□□ 0.74
TMEM140Q9NV12 DUX4L14-201ENST00000621227 1267 ntBASIC19.69■□□□□ 0.74
TMEM140Q9NV12 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM140Q9NV12 MIR219A2-201ENST00000608502 1504 ntBASIC19.68■□□□□ 0.74
TMEM140Q9NV12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM140Q9NV12 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM140Q9NV12 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM140Q9NV12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM140Q9NV12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM140Q9NV12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TMEM140Q9NV12 AC010501.1-201ENST00000606270 1962 ntBASIC19.67■□□□□ 0.74
TMEM140Q9NV12 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM140Q9NV12 ERN1-208ENST00000606895 2068 ntBASIC19.67■□□□□ 0.74
TMEM140Q9NV12 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 AC148477.6-201ENST00000623746 465 ntBASIC19.66■□□□□ 0.74
TMEM140Q9NV12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM140Q9NV12 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM140Q9NV12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM140Q9NV12 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM140Q9NV12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM140Q9NV12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM140Q9NV12 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms