Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.68■■□□□ 1.54
SMC6Q96SB8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMC6Q96SB8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.68■■□□□ 1.54
SMC6Q96SB8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.67■■□□□ 1.54
SMC6Q96SB8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC6Q96SB8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SMC6Q96SB8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC6Q96SB8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC6Q96SB8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMC6Q96SB8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC6Q96SB8 MIR3665-201ENST00000578708 105 ntBASIC24.66■■□□□ 1.54
SMC6Q96SB8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC6Q96SB8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
SMC6Q96SB8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.65■■□□□ 1.54
SMC6Q96SB8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMC6Q96SB8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMC6Q96SB8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SMC6Q96SB8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SMC6Q96SB8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.64■■□□□ 1.54
SMC6Q96SB8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMC6Q96SB8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMC6Q96SB8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SMC6Q96SB8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.63■■□□□ 1.53
SMC6Q96SB8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
SMC6Q96SB8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.63■■□□□ 1.53
SMC6Q96SB8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SMC6Q96SB8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC6Q96SB8 ERN1-208ENST00000606895 2068 ntBASIC24.62■■□□□ 1.53
SMC6Q96SB8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC6Q96SB8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.61■■□□□ 1.53
SMC6Q96SB8 WHAMMP3-201ENST00000611636 1609 ntBASIC24.61■■□□□ 1.53
SMC6Q96SB8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMC6Q96SB8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.61■■□□□ 1.53
SMC6Q96SB8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.61■■□□□ 1.53
SMC6Q96SB8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMC6Q96SB8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC6Q96SB8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC6Q96SB8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SMC6Q96SB8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC6Q96SB8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SMC6Q96SB8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC6Q96SB8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMC6Q96SB8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.59■■□□□ 1.53
SMC6Q96SB8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.59■■□□□ 1.53
SMC6Q96SB8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.59■■□□□ 1.53
SMC6Q96SB8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SMC6Q96SB8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMC6Q96SB8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC6Q96SB8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SMC6Q96SB8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.58■■□□□ 1.53
SMC6Q96SB8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.58■■□□□ 1.53
SMC6Q96SB8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SMC6Q96SB8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC6Q96SB8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC6Q96SB8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SMC6Q96SB8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SMC6Q96SB8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SMC6Q96SB8 DUX4L28-201ENST00000623687 678 ntBASIC24.56■■□□□ 1.52
SMC6Q96SB8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC6Q96SB8 AC010501.1-201ENST00000606270 1962 ntBASIC24.56■■□□□ 1.52
SMC6Q96SB8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC6Q96SB8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SMC6Q96SB8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SMC6Q96SB8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC6Q96SB8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SMC6Q96SB8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC6Q96SB8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC6Q96SB8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC6Q96SB8 AC110285.7-201ENST00000624417 1536 ntBASIC24.54■■□□□ 1.52
SMC6Q96SB8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC6Q96SB8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC6Q96SB8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.52■■□□□ 1.52
SMC6Q96SB8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.52■■□□□ 1.52
SMC6Q96SB8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMC6Q96SB8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMC6Q96SB8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 AC142381.3-201ENST00000568208 1670 ntBASIC24.51■■□□□ 1.51
SMC6Q96SB8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 AC087741.3-201ENST00000624270 1347 ntBASIC24.51■■□□□ 1.51
SMC6Q96SB8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMC6Q96SB8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
SMC6Q96SB8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMC6Q96SB8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMC6Q96SB8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.5■■□□□ 1.51
SMC6Q96SB8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.5■■□□□ 1.51
SMC6Q96SB8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMC6Q96SB8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms