Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56Q96MV1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56Q96MV1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM56Q96MV1 AC010501.1-201ENST00000606270 1962 ntBASIC20.08■□□□□ 0.8
TMEM56Q96MV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 AC142381.3-201ENST00000568208 1670 ntBASIC20.05■□□□□ 0.8
TMEM56Q96MV1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 AC110285.7-201ENST00000624417 1536 ntBASIC20.04■□□□□ 0.8
TMEM56Q96MV1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 AC044849.2-201ENST00000606596 710 ntBASIC20.02■□□□□ 0.8
TMEM56Q96MV1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 AC087741.3-201ENST00000624270 1347 ntBASIC20.01■□□□□ 0.79
TMEM56Q96MV1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20■□□□□ 0.79
TMEM56Q96MV1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM56Q96MV1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 AL162393.1-201ENST00000437852 946 ntBASIC19.95■□□□□ 0.78
TMEM56Q96MV1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms