Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP44Q96MT7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP44Q96MT7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP44Q96MT7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.97■■■□□ 2.71
CFAP44Q96MT7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.97■■■□□ 2.71
CFAP44Q96MT7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CFAP44Q96MT7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFAP44Q96MT7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CFAP44Q96MT7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.96■■■□□ 2.71
CFAP44Q96MT7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
CFAP44Q96MT7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CFAP44Q96MT7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.95■■■□□ 2.71
CFAP44Q96MT7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
CFAP44Q96MT7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFAP44Q96MT7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFAP44Q96MT7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFAP44Q96MT7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFAP44Q96MT7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.94■■■□□ 2.7
CFAP44Q96MT7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CFAP44Q96MT7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.94■■■□□ 2.7
CFAP44Q96MT7 U85056.1-201ENST00000616429 682 ntBASIC31.94■■■□□ 2.7
CFAP44Q96MT7 AC142472.1-201ENST00000612013 1741 ntBASIC31.94■■■□□ 2.7
CFAP44Q96MT7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 MIR3960-201ENST00000583311 91 ntBASIC31.93■■■□□ 2.7
CFAP44Q96MT7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP44Q96MT7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP44Q96MT7 RP9P-202ENST00000450133 1212 ntBASIC31.92■■■□□ 2.7
CFAP44Q96MT7 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.92■■■□□ 2.7
CFAP44Q96MT7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP44Q96MT7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.92■■■□□ 2.7
CFAP44Q96MT7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP44Q96MT7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.91■■■□□ 2.7
CFAP44Q96MT7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
CFAP44Q96MT7 NTF6A-201ENST00000591175 560 ntBASIC31.91■■■□□ 2.7
CFAP44Q96MT7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP44Q96MT7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP44Q96MT7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP44Q96MT7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP44Q96MT7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP44Q96MT7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP44Q96MT7 AP004609.3-201ENST00000610705 1884 ntBASIC31.89■■■□□ 2.7
CFAP44Q96MT7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.89■■■□□ 2.7
CFAP44Q96MT7 AC026202.3-201ENST00000600805 1127 ntBASIC31.89■■■□□ 2.7
CFAP44Q96MT7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP44Q96MT7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CFAP44Q96MT7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP44Q96MT7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP44Q96MT7 AC009831.1-201ENST00000580420 1582 ntBASIC31.87■■■□□ 2.69
CFAP44Q96MT7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP44Q96MT7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP44Q96MT7 AC093536.1-201ENST00000569153 554 ntBASIC31.87■■■□□ 2.69
CFAP44Q96MT7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP44Q96MT7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP44Q96MT7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CFAP44Q96MT7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
CFAP44Q96MT7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CFAP44Q96MT7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CFAP44Q96MT7 RAP2CP1-202ENST00000605179 643 ntBASIC31.84■■■□□ 2.69
CFAP44Q96MT7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CFAP44Q96MT7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CFAP44Q96MT7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.84■■■□□ 2.69
CFAP44Q96MT7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CFAP44Q96MT7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFAP44Q96MT7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP44Q96MT7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP44Q96MT7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.82■■■□□ 2.68
CFAP44Q96MT7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP44Q96MT7 AC133552.2-201ENST00000619106 1032 ntBASIC31.81■■■□□ 2.68
CFAP44Q96MT7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP44Q96MT7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP44Q96MT7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP44Q96MT7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP44Q96MT7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP44Q96MT7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.79■■■□□ 2.68
CFAP44Q96MT7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFAP44Q96MT7 KRT18P60-201ENST00000312876 1297 ntBASIC31.78■■■□□ 2.68
CFAP44Q96MT7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.78■■■□□ 2.68
CFAP44Q96MT7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFAP44Q96MT7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.78■■■□□ 2.68
CFAP44Q96MT7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.78■■■□□ 2.68
CFAP44Q96MT7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms