Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RTN4IP1Q8WWV3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RTN4IP1Q8WWV3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
RTN4IP1Q8WWV3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L13-201ENST00000554103 1267 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L15-201ENST00000611059 1267 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L23-201ENST00000615195 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L24-201ENST00000617576 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L22-201ENST00000618238 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L20-201ENST00000619712 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L21-201ENST00000622058 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L10-201ENST00000622460 1267 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L25-201ENST00000624915 1269 ntBASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4IP1Q8WWV3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN4IP1Q8WWV3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 AC093323.1-202ENST00000635031 2045 ntBASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RTN4IP1Q8WWV3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN4IP1Q8WWV3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4IP1Q8WWV3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4IP1Q8WWV3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4IP1Q8WWV3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4IP1Q8WWV3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4IP1Q8WWV3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4IP1Q8WWV3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4IP1Q8WWV3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 AC142472.1-201ENST00000612013 1741 ntBASIC20.39■□□□□ 0.85
RTN4IP1Q8WWV3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.38■□□□□ 0.85
RTN4IP1Q8WWV3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4IP1Q8WWV3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4IP1Q8WWV3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms