Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SREK1IP1Q8N9Q2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SREK1IP1Q8N9Q2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SREK1IP1Q8N9Q2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SREK1IP1Q8N9Q2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.31■□□□□ 0.84
SREK1IP1Q8N9Q2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SREK1IP1Q8N9Q2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SREK1IP1Q8N9Q2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SREK1IP1Q8N9Q2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SREK1IP1Q8N9Q2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SREK1IP1Q8N9Q2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SREK1IP1Q8N9Q2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SREK1IP1Q8N9Q2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SREK1IP1Q8N9Q2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SREK1IP1Q8N9Q2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SREK1IP1Q8N9Q2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SREK1IP1Q8N9Q2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SREK1IP1Q8N9Q2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SREK1IP1Q8N9Q2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SREK1IP1Q8N9Q2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SREK1IP1Q8N9Q2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SREK1IP1Q8N9Q2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 AL135925.1-201ENST00000605920 1701 ntBASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SREK1IP1Q8N9Q2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SREK1IP1Q8N9Q2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SREK1IP1Q8N9Q2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms