Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01561Q8N1V8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINC01561Q8N1V8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC01561Q8N1V8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LINC01561Q8N1V8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01561Q8N1V8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01561Q8N1V8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 AC142381.3-201ENST00000568208 1670 ntBASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01561Q8N1V8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01561Q8N1V8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01561Q8N1V8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01561Q8N1V8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01561Q8N1V8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LINC01561Q8N1V8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01561Q8N1V8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01561Q8N1V8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01561Q8N1V8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LINC01561Q8N1V8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.33■□□□□ 0.21
LINC01561Q8N1V8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01561Q8N1V8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01561Q8N1V8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 AC093323.1-202ENST00000635031 2045 ntBASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01561Q8N1V8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 DUX4L29-201ENST00000425409 679 ntBASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 AC021231.2-201ENST00000594613 730 ntBASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 ERN1-208ENST00000606895 2068 ntBASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01561Q8N1V8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 AC008813.1-201ENST00000536597 885 ntBASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01561Q8N1V8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms