Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
RNF135Q8IUD6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RNF135Q8IUD6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.08■■□□□ 1.76
RNF135Q8IUD6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF135Q8IUD6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF135Q8IUD6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF135Q8IUD6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RNF135Q8IUD6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF135Q8IUD6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RNF135Q8IUD6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF135Q8IUD6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 MIR6765-201ENST00000614092 87 ntBASIC26.05■■□□□ 1.76
RNF135Q8IUD6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF135Q8IUD6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 AC093536.1-201ENST00000569153 554 ntBASIC26.04■■□□□ 1.76
RNF135Q8IUD6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF135Q8IUD6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 AC025884.2-201ENST00000553429 711 ntBASIC26.03■■□□□ 1.76
RNF135Q8IUD6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 MIR4508-201ENST00000584178 70 ntBASIC26.03■■□□□ 1.76
RNF135Q8IUD6 RAP2CP1-202ENST00000605179 643 ntBASIC26.03■■□□□ 1.76
RNF135Q8IUD6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF135Q8IUD6 AC100797.4-201ENST00000631653 1827 ntBASIC26.02■■□□□ 1.76
RNF135Q8IUD6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RNF135Q8IUD6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF135Q8IUD6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF135Q8IUD6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF135Q8IUD6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.01■■□□□ 1.75
RNF135Q8IUD6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF135Q8IUD6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26■■□□□ 1.75
RNF135Q8IUD6 AL359258.2-201ENST00000564063 1566 ntBASIC26■■□□□ 1.75
RNF135Q8IUD6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26■■□□□ 1.75
RNF135Q8IUD6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RNF135Q8IUD6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
RNF135Q8IUD6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26■■□□□ 1.75
RNF135Q8IUD6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26■■□□□ 1.75
RNF135Q8IUD6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26■■□□□ 1.75
RNF135Q8IUD6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RNF135Q8IUD6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF135Q8IUD6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.99■■□□□ 1.75
RNF135Q8IUD6 AP004833.2-201ENST00000532228 1454 ntBASIC25.98■■□□□ 1.75
RNF135Q8IUD6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF135Q8IUD6 AC008406.3-201ENST00000620001 1374 ntBASIC25.97■■□□□ 1.75
RNF135Q8IUD6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF135Q8IUD6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.97■■□□□ 1.75
RNF135Q8IUD6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF135Q8IUD6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.96■■□□□ 1.75
RNF135Q8IUD6 AC103724.3-201ENST00000564481 992 ntBASIC25.96■■□□□ 1.75
RNF135Q8IUD6 AL031848.2-201ENST00000607670 837 ntBASIC25.96■■□□□ 1.75
RNF135Q8IUD6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF135Q8IUD6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF135Q8IUD6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.95■■□□□ 1.74
RNF135Q8IUD6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RNF135Q8IUD6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.95■■□□□ 1.74
RNF135Q8IUD6 AC018755.3-202ENST00000596210 929 ntBASIC25.94■■□□□ 1.74
RNF135Q8IUD6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.94■■□□□ 1.74
RNF135Q8IUD6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF135Q8IUD6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
RNF135Q8IUD6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms