Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.41■■□□□ 1.18
TUBA1AQ71U36 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 AC100797.4-201ENST00000631653 1827 ntBASIC22.41■■□□□ 1.18
TUBA1AQ71U36 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TUBA1AQ71U36 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TUBA1AQ71U36 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TUBA1AQ71U36 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.39■■□□□ 1.17
TUBA1AQ71U36 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.39■■□□□ 1.17
TUBA1AQ71U36 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.39■■□□□ 1.17
TUBA1AQ71U36 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TUBA1AQ71U36 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TUBA1AQ71U36 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L13-201ENST00000554103 1267 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L15-201ENST00000611059 1267 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L23-201ENST00000615195 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L24-201ENST00000617576 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L22-201ENST00000618238 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L20-201ENST00000619712 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L21-201ENST00000622058 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L10-201ENST00000622460 1267 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 CR559946.2-201ENST00000623684 991 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 DUX4L25-201ENST00000624915 1269 ntBASIC22.38■■□□□ 1.17
TUBA1AQ71U36 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TUBA1AQ71U36 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TUBA1AQ71U36 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TUBA1AQ71U36 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.37■■□□□ 1.17
TUBA1AQ71U36 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.37■■□□□ 1.17
TUBA1AQ71U36 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TUBA1AQ71U36 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.35■■□□□ 1.17
TUBA1AQ71U36 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.35■■□□□ 1.17
TUBA1AQ71U36 MIR3648-2-201ENST00000581792 180 ntBASIC22.35■■□□□ 1.17
TUBA1AQ71U36 AC016575.1-201ENST00000607026 382 ntBASIC22.35■■□□□ 1.17
TUBA1AQ71U36 MIR3648-1-201ENST00000615959 180 ntBASIC22.35■■□□□ 1.17
TUBA1AQ71U36 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.34■■□□□ 1.17
TUBA1AQ71U36 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TUBA1AQ71U36 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
TUBA1AQ71U36 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TUBA1AQ71U36 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 HLA-V-202ENST00000446817 847 ntBASIC22.33■■□□□ 1.17
TUBA1AQ71U36 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TUBA1AQ71U36 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TUBA1AQ71U36 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TUBA1AQ71U36 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TUBA1AQ71U36 AC092803.2-201ENST00000564287 1899 ntBASIC22.32■■□□□ 1.16
TUBA1AQ71U36 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.32■■□□□ 1.16
TUBA1AQ71U36 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.31■■□□□ 1.16
TUBA1AQ71U36 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TUBA1AQ71U36 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TUBA1AQ71U36 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 AC110285.7-201ENST00000624417 1536 ntBASIC22.3■■□□□ 1.16
TUBA1AQ71U36 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TUBA1AQ71U36 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TUBA1AQ71U36 AP002414.2-202ENST00000590929 1450 ntBASIC22.28■■□□□ 1.16
TUBA1AQ71U36 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TUBA1AQ71U36 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TUBA1AQ71U36 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.27■■□□□ 1.16
TUBA1AQ71U36 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TUBA1AQ71U36 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.15
TUBA1AQ71U36 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TUBA1AQ71U36 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms