Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CDCP2Q5VXM1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CDCP2Q5VXM1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CDCP2Q5VXM1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
CDCP2Q5VXM1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDCP2Q5VXM1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.66■■□□□ 1.38
CDCP2Q5VXM1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.66■■□□□ 1.38
CDCP2Q5VXM1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 AC103724.3-201ENST00000564481 992 ntBASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDCP2Q5VXM1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDCP2Q5VXM1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDCP2Q5VXM1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDCP2Q5VXM1 AC131212.1-201ENST00000613771 668 ntBASIC23.64■■□□□ 1.37
CDCP2Q5VXM1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 THA1P-201ENST00000590384 1145 ntBASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDCP2Q5VXM1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.62■■□□□ 1.37
CDCP2Q5VXM1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 AC019171.1-201ENST00000601251 1056 ntBASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 AL031848.2-201ENST00000607670 837 ntBASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDCP2Q5VXM1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.6■■□□□ 1.37
CDCP2Q5VXM1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCP2Q5VXM1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCP2Q5VXM1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDCP2Q5VXM1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDCP2Q5VXM1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.58■■□□□ 1.36
CDCP2Q5VXM1 AC019069.1-201ENST00000610008 1333 ntBASIC23.58■■□□□ 1.36
CDCP2Q5VXM1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDCP2Q5VXM1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCP2Q5VXM1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCP2Q5VXM1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.55■■□□□ 1.36
CDCP2Q5VXM1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CDCP2Q5VXM1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CDCP2Q5VXM1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCP2Q5VXM1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 AC087393.1-201ENST00000582896 145 ntBASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCP2Q5VXM1 WHAMMP3-201ENST00000611636 1609 ntBASIC23.53■■□□□ 1.36
CDCP2Q5VXM1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDCP2Q5VXM1 AL356441.2-201ENST00000443009 864 ntBASIC23.53■■□□□ 1.36
CDCP2Q5VXM1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.53■■□□□ 1.36
CDCP2Q5VXM1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDCP2Q5VXM1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDCP2Q5VXM1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
CDCP2Q5VXM1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDCP2Q5VXM1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDCP2Q5VXM1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDCP2Q5VXM1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms