Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TTC39BQ5VTQ0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.54■■□□□ 1.68
TTC39BQ5VTQ0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.54■■□□□ 1.68
TTC39BQ5VTQ0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39BQ5VTQ0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39BQ5VTQ0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39BQ5VTQ0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39BQ5VTQ0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.52■■□□□ 1.68
TTC39BQ5VTQ0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
TTC39BQ5VTQ0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TTC39BQ5VTQ0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39BQ5VTQ0 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.48■■□□□ 1.67
TTC39BQ5VTQ0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TTC39BQ5VTQ0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39BQ5VTQ0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39BQ5VTQ0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.47■■□□□ 1.67
TTC39BQ5VTQ0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39BQ5VTQ0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39BQ5VTQ0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC39BQ5VTQ0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC39BQ5VTQ0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.46■■□□□ 1.67
TTC39BQ5VTQ0 ABHD17AP5-201ENST00000580133 923 ntBASIC25.46■■□□□ 1.67
TTC39BQ5VTQ0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TTC39BQ5VTQ0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.45■■□□□ 1.67
TTC39BQ5VTQ0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39BQ5VTQ0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.44■■□□□ 1.66
TTC39BQ5VTQ0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TTC39BQ5VTQ0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.43■■□□□ 1.66
TTC39BQ5VTQ0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39BQ5VTQ0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 AC025884.2-201ENST00000553429 711 ntBASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.41■■□□□ 1.66
TTC39BQ5VTQ0 SMPD5-203ENST00000639008 1464 ntBASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39BQ5VTQ0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39BQ5VTQ0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39BQ5VTQ0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.38■■□□□ 1.65
TTC39BQ5VTQ0 AC007029.1-201ENST00000604183 313 ntBASIC25.38■■□□□ 1.65
TTC39BQ5VTQ0 AL449106.1-201ENST00000608517 1980 ntBASIC25.38■■□□□ 1.65
TTC39BQ5VTQ0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC39BQ5VTQ0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39BQ5VTQ0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39BQ5VTQ0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39BQ5VTQ0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
TTC39BQ5VTQ0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39BQ5VTQ0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
TTC39BQ5VTQ0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TTC39BQ5VTQ0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC39BQ5VTQ0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
TTC39BQ5VTQ0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC39BQ5VTQ0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TTC39BQ5VTQ0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39BQ5VTQ0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39BQ5VTQ0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.35■■□□□ 1.65
TTC39BQ5VTQ0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.35■■□□□ 1.65
TTC39BQ5VTQ0 AL359504.2-201ENST00000605506 1601 ntBASIC25.34■■□□□ 1.65
TTC39BQ5VTQ0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC39BQ5VTQ0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC39BQ5VTQ0 MIR3960-201ENST00000583311 91 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms