Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.32■■□□□ 1
SNAI3Q3KNW1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNAI3Q3KNW1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.32■■□□□ 1
SNAI3Q3KNW1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.32■■□□□ 1
SNAI3Q3KNW1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNAI3Q3KNW1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNAI3Q3KNW1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SNAI3Q3KNW1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNAI3Q3KNW1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.3■■□□□ 1
SNAI3Q3KNW1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SNAI3Q3KNW1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SNAI3Q3KNW1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.3■■□□□ 1
SNAI3Q3KNW1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNAI3Q3KNW1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNAI3Q3KNW1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.29■■□□□ 1
SNAI3Q3KNW1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SNAI3Q3KNW1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNAI3Q3KNW1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNAI3Q3KNW1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNAI3Q3KNW1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.28■■□□□ 1
SNAI3Q3KNW1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.27■■□□□ 1
SNAI3Q3KNW1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.27■■□□□ 1
SNAI3Q3KNW1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SNAI3Q3KNW1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNAI3Q3KNW1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNAI3Q3KNW1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNAI3Q3KNW1 AC092803.2-201ENST00000564287 1899 ntBASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNAI3Q3KNW1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNAI3Q3KNW1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SNAI3Q3KNW1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SNAI3Q3KNW1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNAI3Q3KNW1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNAI3Q3KNW1 AC145676.1-201ENST00000514988 2004 ntBASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNAI3Q3KNW1 MIR639-201ENST00000384974 98 ntBASIC21.23■□□□□ 0.99
SNAI3Q3KNW1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 AL359504.2-201ENST00000605506 1601 ntBASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.22■□□□□ 0.99
SNAI3Q3KNW1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 AC126177.7-201ENST00000547904 679 ntBASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAI3Q3KNW1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SNAI3Q3KNW1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNAI3Q3KNW1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAI3Q3KNW1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.17■□□□□ 0.98
SNAI3Q3KNW1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SNAI3Q3KNW1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms