Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SHROOM1Q2M3G4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.06■■■□□ 2.24
SHROOM1Q2M3G4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
SHROOM1Q2M3G4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
SHROOM1Q2M3G4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.05■■■□□ 2.24
SHROOM1Q2M3G4 MIR3960-201ENST00000583311 91 ntBASIC29.05■■■□□ 2.24
SHROOM1Q2M3G4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SHROOM1Q2M3G4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
SHROOM1Q2M3G4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
SHROOM1Q2M3G4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
SHROOM1Q2M3G4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SHROOM1Q2M3G4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SHROOM1Q2M3G4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
SHROOM1Q2M3G4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.01■■■□□ 2.23
SHROOM1Q2M3G4 AC010980.1-201ENST00000587192 1142 ntBASIC29.01■■■□□ 2.23
SHROOM1Q2M3G4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29■■■□□ 2.23
SHROOM1Q2M3G4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
SHROOM1Q2M3G4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SHROOM1Q2M3G4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SHROOM1Q2M3G4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
SHROOM1Q2M3G4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SHROOM1Q2M3G4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SHROOM1Q2M3G4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.98■■■□□ 2.23
SHROOM1Q2M3G4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
SHROOM1Q2M3G4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.97■■■□□ 2.23
SHROOM1Q2M3G4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SHROOM1Q2M3G4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SHROOM1Q2M3G4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.95■■■□□ 2.22
SHROOM1Q2M3G4 PVT1_1.1-201ENST00000615125 194 ntBASIC28.95■■■□□ 2.22
SHROOM1Q2M3G4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SHROOM1Q2M3G4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
SHROOM1Q2M3G4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 AL451085.2-201ENST00000605085 799 ntBASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 KRT8P33-201ENST00000508125 1423 ntBASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHROOM1Q2M3G4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.92■■■□□ 2.22
SHROOM1Q2M3G4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SHROOM1Q2M3G4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.92■■■□□ 2.22
SHROOM1Q2M3G4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SHROOM1Q2M3G4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 AL449106.1-201ENST00000608517 1980 ntBASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.91■■■□□ 2.22
SHROOM1Q2M3G4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SHROOM1Q2M3G4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.9■■■□□ 2.22
SHROOM1Q2M3G4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.9■■■□□ 2.22
SHROOM1Q2M3G4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
SHROOM1Q2M3G4 MIR6765-201ENST00000614092 87 ntBASIC28.9■■■□□ 2.22
SHROOM1Q2M3G4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 BHLHE23-202ENST00000612929 1109 ntBASIC28.89■■■□□ 2.22
SHROOM1Q2M3G4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.89■■■□□ 2.21
SHROOM1Q2M3G4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.88■■■□□ 2.21
SHROOM1Q2M3G4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
SHROOM1Q2M3G4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 AC103834.1-201ENST00000520383 144 ntBASIC28.87■■■□□ 2.21
SHROOM1Q2M3G4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
SHROOM1Q2M3G4 LINC01003-201ENST00000564834 1764 ntBASIC28.86■■■□□ 2.21
SHROOM1Q2M3G4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.86■■■□□ 2.21
SHROOM1Q2M3G4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.85■■■□□ 2.21
SHROOM1Q2M3G4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SHROOM1Q2M3G4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.85■■■□□ 2.21
SHROOM1Q2M3G4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SHROOM1Q2M3G4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.83■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms