Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1AQ02539 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1AQ02539 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST1H1AQ02539 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HIST1H1AQ02539 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIST1H1AQ02539 LINC01971-201ENST00000617888 1048 ntBASIC18.56■□□□□ 0.56
HIST1H1AQ02539 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST1H1AQ02539 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H1AQ02539 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HIST1H1AQ02539 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST1H1AQ02539 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1AQ02539 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 AP004609.3-201ENST00000610705 1884 ntBASIC18.53■□□□□ 0.56
HIST1H1AQ02539 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HIST1H1AQ02539 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1AQ02539 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H1AQ02539 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1AQ02539 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 WHAMMP3-201ENST00000611636 1609 ntBASIC18.5■□□□□ 0.55
HIST1H1AQ02539 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H1AQ02539 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H1AQ02539 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L13-201ENST00000554103 1267 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L15-201ENST00000611059 1267 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L23-201ENST00000615195 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L24-201ENST00000617576 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L22-201ENST00000618238 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L20-201ENST00000619712 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L21-201ENST00000622058 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L10-201ENST00000622460 1267 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 DUX4L25-201ENST00000624915 1269 ntBASIC18.48■□□□□ 0.55
HIST1H1AQ02539 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1AQ02539 AC093323.1-202ENST00000635031 2045 ntBASIC18.47■□□□□ 0.55
HIST1H1AQ02539 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1AQ02539 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H1AQ02539 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1AQ02539 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H1AQ02539 DUX4L11-201ENST00000611504 1267 ntBASIC18.46■□□□□ 0.55
HIST1H1AQ02539 DUX4L12-201ENST00000614593 1267 ntBASIC18.46■□□□□ 0.55
HIST1H1AQ02539 DUX4L14-201ENST00000621227 1267 ntBASIC18.46■□□□□ 0.55
HIST1H1AQ02539 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1AQ02539 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.46■□□□□ 0.54
HIST1H1AQ02539 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1AQ02539 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1AQ02539 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1AQ02539 DUSP8P4-201ENST00000399538 1761 ntBASIC18.44■□□□□ 0.54
HIST1H1AQ02539 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1AQ02539 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1AQ02539 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms