Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.59■■□□□ 1.05
LSM6P62312 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LSM6P62312 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSM6P62312 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
LSM6P62312 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LSM6P62312 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LSM6P62312 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
LSM6P62312 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.57■■□□□ 1.04
LSM6P62312 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.57■■□□□ 1.04
LSM6P62312 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.57■■□□□ 1.04
LSM6P62312 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.57■■□□□ 1.04
LSM6P62312 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSM6P62312 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.56■■□□□ 1.04
LSM6P62312 AC145676.1-201ENST00000514988 2004 ntBASIC21.55■■□□□ 1.04
LSM6P62312 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSM6P62312 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LSM6P62312 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.55■■□□□ 1.04
LSM6P62312 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.54■■□□□ 1.04
LSM6P62312 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSM6P62312 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSM6P62312 AC092803.2-201ENST00000564287 1899 ntBASIC21.54■■□□□ 1.04
LSM6P62312 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSM6P62312 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSM6P62312 MIR639-201ENST00000384974 98 ntBASIC21.54■■□□□ 1.04
LSM6P62312 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.54■■□□□ 1.04
LSM6P62312 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.54■■□□□ 1.04
LSM6P62312 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.54■■□□□ 1.04
LSM6P62312 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSM6P62312 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.54■■□□□ 1.04
LSM6P62312 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM6P62312 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LSM6P62312 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM6P62312 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM6P62312 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LSM6P62312 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSM6P62312 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
LSM6P62312 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LSM6P62312 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.51■■□□□ 1.03
LSM6P62312 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LSM6P62312 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LSM6P62312 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.51■■□□□ 1.03
LSM6P62312 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM6P62312 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LSM6P62312 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM6P62312 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM6P62312 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM6P62312 AL359504.2-201ENST00000605506 1601 ntBASIC21.5■■□□□ 1.03
LSM6P62312 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.5■■□□□ 1.03
LSM6P62312 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.5■■□□□ 1.03
LSM6P62312 DUSP8P4-201ENST00000399538 1761 ntBASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSM6P62312 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
LSM6P62312 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LSM6P62312 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LSM6P62312 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LSM6P62312 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSM6P62312 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LSM6P62312 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.48■■□□□ 1.03
LSM6P62312 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.48■■□□□ 1.03
LSM6P62312 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.47■■□□□ 1.03
LSM6P62312 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
LSM6P62312 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.47■■□□□ 1.03
LSM6P62312 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.47■■□□□ 1.03
LSM6P62312 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM6P62312 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LSM6P62312 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.46■■□□□ 1.03
LSM6P62312 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSM6P62312 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
LSM6P62312 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LSM6P62312 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LSM6P62312 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.45■■□□□ 1.02
LSM6P62312 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSM6P62312 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LSM6P62312 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSM6P62312 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LSM6P62312 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms