Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.08■■□□□ 1.93
CHRNA1P02708 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHRNA1P02708 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHRNA1P02708 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.08■■□□□ 1.93
CHRNA1P02708 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.08■■□□□ 1.93
CHRNA1P02708 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.08■■□□□ 1.93
CHRNA1P02708 AC074183.2-201ENST00000623112 922 ntBASIC27.08■■□□□ 1.93
CHRNA1P02708 AL035685.1-201ENST00000636663 812 ntBASIC27.08■■□□□ 1.93
CHRNA1P02708 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.08■■□□□ 1.93
CHRNA1P02708 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
CHRNA1P02708 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.07■■□□□ 1.92
CHRNA1P02708 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHRNA1P02708 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CHRNA1P02708 AC018755.3-202ENST00000596210 929 ntBASIC27.07■■□□□ 1.92
CHRNA1P02708 PVT1_1.1-201ENST00000615125 194 ntBASIC27.07■■□□□ 1.92
CHRNA1P02708 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CHRNA1P02708 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHRNA1P02708 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.06■■□□□ 1.92
CHRNA1P02708 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHRNA1P02708 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.06■■□□□ 1.92
CHRNA1P02708 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CHRNA1P02708 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHRNA1P02708 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.06■■□□□ 1.92
CHRNA1P02708 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHRNA1P02708 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.05■■□□□ 1.92
CHRNA1P02708 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHRNA1P02708 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.05■■□□□ 1.92
CHRNA1P02708 KRT8P33-201ENST00000508125 1423 ntBASIC27.05■■□□□ 1.92
CHRNA1P02708 AC139795.1-202ENST00000500444 432 ntBASIC27.04■■□□□ 1.92
CHRNA1P02708 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.04■■□□□ 1.92
CHRNA1P02708 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.04■■□□□ 1.92
CHRNA1P02708 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHRNA1P02708 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHRNA1P02708 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHRNA1P02708 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.03■■□□□ 1.92
CHRNA1P02708 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHRNA1P02708 AC103834.1-201ENST00000520383 144 ntBASIC27.03■■□□□ 1.92
CHRNA1P02708 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.03■■□□□ 1.92
CHRNA1P02708 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.02■■□□□ 1.92
CHRNA1P02708 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHRNA1P02708 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHRNA1P02708 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHRNA1P02708 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHRNA1P02708 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHRNA1P02708 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHRNA1P02708 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHRNA1P02708 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHRNA1P02708 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHRNA1P02708 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27■■□□□ 1.91
CHRNA1P02708 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
CHRNA1P02708 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27■■□□□ 1.91
CHRNA1P02708 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27■■□□□ 1.91
CHRNA1P02708 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27■■□□□ 1.91
CHRNA1P02708 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27■■□□□ 1.91
CHRNA1P02708 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CHRNA1P02708 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHRNA1P02708 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.99■■□□□ 1.91
CHRNA1P02708 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHRNA1P02708 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHRNA1P02708 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHRNA1P02708 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHRNA1P02708 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHRNA1P02708 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHRNA1P02708 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHRNA1P02708 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHRNA1P02708 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.96■■□□□ 1.91
CHRNA1P02708 AC139426.1-201ENST00000568218 2529 ntBASIC26.96■■□□□ 1.91
CHRNA1P02708 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHRNA1P02708 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHRNA1P02708 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.95■■□□□ 1.9
CHRNA1P02708 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
CHRNA1P02708 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHRNA1P02708 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CHRNA1P02708 DRD5P2-201ENST00000421395 2012 ntBASIC26.94■■□□□ 1.9
CHRNA1P02708 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.94■■□□□ 1.9
CHRNA1P02708 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.94■■□□□ 1.9
CHRNA1P02708 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.94■■□□□ 1.9
CHRNA1P02708 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CHRNA1P02708 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.93■■□□□ 1.9
CHRNA1P02708 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHRNA1P02708 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CHRNA1P02708 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.93■■□□□ 1.9
CHRNA1P02708 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.93■■□□□ 1.9
CHRNA1P02708 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CHRNA1P02708 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CHRNA1P02708 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHRNA1P02708 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHRNA1P02708 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.92■■□□□ 1.9
CHRNA1P02708 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHRNA1P02708 YBX1P4-201ENST00000392794 808 ntBASIC26.92■■□□□ 1.9
CHRNA1P02708 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CHRNA1P02708 AC009299.2-201ENST00000482477 511 ntBASIC26.91■■□□□ 1.9
CHRNA1P02708 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CHRNA1P02708 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHRNA1P02708 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
CHRNA1P02708 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.9■■□□□ 1.9
CHRNA1P02708 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHRNA1P02708 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.9■■□□□ 1.9
CHRNA1P02708 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
CHRNA1P02708 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms