Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
KCNQ3O43525 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.96■■■□□ 2.71
KCNQ3O43525 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
KCNQ3O43525 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.95■■■□□ 2.71
KCNQ3O43525 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
KCNQ3O43525 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.94■■■□□ 2.7
KCNQ3O43525 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
KCNQ3O43525 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
KCNQ3O43525 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
KCNQ3O43525 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.94■■■□□ 2.7
KCNQ3O43525 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.94■■■□□ 2.7
KCNQ3O43525 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KCNQ3O43525 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
KCNQ3O43525 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
KCNQ3O43525 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNQ3O43525 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNQ3O43525 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNQ3O43525 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
KCNQ3O43525 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
KCNQ3O43525 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
KCNQ3O43525 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
KCNQ3O43525 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
KCNQ3O43525 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
KCNQ3O43525 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
KCNQ3O43525 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.9■■■□□ 2.7
KCNQ3O43525 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
KCNQ3O43525 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
KCNQ3O43525 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
KCNQ3O43525 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.88■■■□□ 2.69
KCNQ3O43525 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
KCNQ3O43525 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
KCNQ3O43525 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.87■■■□□ 2.69
KCNQ3O43525 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
KCNQ3O43525 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
KCNQ3O43525 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
KCNQ3O43525 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
KCNQ3O43525 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.85■■■□□ 2.69
KCNQ3O43525 AL449106.1-201ENST00000608517 1980 ntBASIC31.85■■■□□ 2.69
KCNQ3O43525 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
KCNQ3O43525 LINC01003-201ENST00000564834 1764 ntBASIC31.84■■■□□ 2.69
KCNQ3O43525 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
KCNQ3O43525 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.84■■■□□ 2.69
KCNQ3O43525 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.84■■■□□ 2.69
KCNQ3O43525 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
KCNQ3O43525 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
KCNQ3O43525 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
KCNQ3O43525 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
KCNQ3O43525 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.81■■■□□ 2.68
KCNQ3O43525 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
KCNQ3O43525 AC010980.1-201ENST00000587192 1142 ntBASIC31.81■■■□□ 2.68
KCNQ3O43525 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
KCNQ3O43525 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.81■■■□□ 2.68
KCNQ3O43525 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.81■■■□□ 2.68
KCNQ3O43525 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
KCNQ3O43525 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
KCNQ3O43525 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
KCNQ3O43525 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
KCNQ3O43525 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNQ3O43525 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KCNQ3O43525 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
KCNQ3O43525 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KCNQ3O43525 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.79■■■□□ 2.68
KCNQ3O43525 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
KCNQ3O43525 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
KCNQ3O43525 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
KCNQ3O43525 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
KCNQ3O43525 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
KCNQ3O43525 PVT1_1.1-201ENST00000615125 194 ntBASIC31.78■■■□□ 2.68
KCNQ3O43525 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNQ3O43525 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.78■■■□□ 2.68
KCNQ3O43525 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ3O43525 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ3O43525 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ3O43525 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ3O43525 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ3O43525 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.77■■■□□ 2.68
KCNQ3O43525 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.77■■■□□ 2.68
KCNQ3O43525 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
KCNQ3O43525 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
KCNQ3O43525 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
KCNQ3O43525 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ3O43525 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.76■■■□□ 2.67
KCNQ3O43525 MIR6765-201ENST00000614092 87 ntBASIC31.76■■■□□ 2.67
KCNQ3O43525 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.76■■■□□ 2.67
KCNQ3O43525 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ3O43525 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
KCNQ3O43525 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ3O43525 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
KCNQ3O43525 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.75■■■□□ 2.67
KCNQ3O43525 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.75■■■□□ 2.67
KCNQ3O43525 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNQ3O43525 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.73■■■□□ 2.67
KCNQ3O43525 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNQ3O43525 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.73■■■□□ 2.67
KCNQ3O43525 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.73■■■□□ 2.67
KCNQ3O43525 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNQ3O43525 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ3O43525 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ3O43525 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ3O43525 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms