Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF223E7ERA6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF223E7ERA6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF223E7ERA6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF223E7ERA6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF223E7ERA6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF223E7ERA6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF223E7ERA6 AL031848.2-201ENST00000607670 837 ntBASIC20.57■□□□□ 0.88
RNF223E7ERA6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF223E7ERA6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF223E7ERA6 AC103724.3-201ENST00000564481 992 ntBASIC20.56■□□□□ 0.88
RNF223E7ERA6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF223E7ERA6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF223E7ERA6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF223E7ERA6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF223E7ERA6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF223E7ERA6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF223E7ERA6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF223E7ERA6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF223E7ERA6 AL359504.2-201ENST00000605506 1601 ntBASIC20.54■□□□□ 0.88
RNF223E7ERA6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF223E7ERA6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF223E7ERA6 AP002414.2-202ENST00000590929 1450 ntBASIC20.54■□□□□ 0.88
RNF223E7ERA6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF223E7ERA6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF223E7ERA6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF223E7ERA6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RNF223E7ERA6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF223E7ERA6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF223E7ERA6 AL139393.2-201ENST00000608721 2025 ntBASIC20.52■□□□□ 0.88
RNF223E7ERA6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF223E7ERA6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF223E7ERA6 AL356441.2-201ENST00000443009 864 ntBASIC20.51■□□□□ 0.87
RNF223E7ERA6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF223E7ERA6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF223E7ERA6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF223E7ERA6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF223E7ERA6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF223E7ERA6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
RNF223E7ERA6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF223E7ERA6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RNF223E7ERA6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF223E7ERA6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF223E7ERA6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF223E7ERA6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RNF223E7ERA6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF223E7ERA6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF223E7ERA6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF223E7ERA6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF223E7ERA6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF223E7ERA6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF223E7ERA6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF223E7ERA6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF223E7ERA6 AC239859.2-201ENST00000444165 318 ntBASIC20.47■□□□□ 0.87
RNF223E7ERA6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF223E7ERA6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF223E7ERA6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF223E7ERA6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF223E7ERA6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF223E7ERA6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF223E7ERA6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF223E7ERA6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF223E7ERA6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF223E7ERA6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF223E7ERA6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RNF223E7ERA6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF223E7ERA6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF223E7ERA6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF223E7ERA6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF223E7ERA6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF223E7ERA6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF223E7ERA6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF223E7ERA6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF223E7ERA6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF223E7ERA6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF223E7ERA6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF223E7ERA6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
RNF223E7ERA6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF223E7ERA6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF223E7ERA6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF223E7ERA6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF223E7ERA6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF223E7ERA6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms