Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRDV1A0A1B0GX56 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRDV1A0A1B0GX56 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TRDV1A0A1B0GX56 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRDV1A0A1B0GX56 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 AC022211.4-201ENST00000625094 2161 ntBASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 AC138932.3-201ENST00000567634 1902 ntBASIC21.55■■□□□ 1.04
TRDV1A0A1B0GX56 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 WHAMMP3-201ENST00000611636 1609 ntBASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRDV1A0A1B0GX56 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.53■■□□□ 1.04
TRDV1A0A1B0GX56 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 MIR762-201ENST00000390236 83 ntBASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRDV1A0A1B0GX56 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRDV1A0A1B0GX56 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRDV1A0A1B0GX56 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRDV1A0A1B0GX56 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.49■■□□□ 1.03
TRDV1A0A1B0GX56 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 AC108673.1-201ENST00000510422 1159 ntBASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRDV1A0A1B0GX56 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.47■■□□□ 1.03
TRDV1A0A1B0GX56 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRDV1A0A1B0GX56 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.45■■□□□ 1.02
TRDV1A0A1B0GX56 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRDV1A0A1B0GX56 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms