Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-1A0A0K0K1A3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 DUX4L11-201ENST00000611504 1267 ntBASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 DUX4L12-201ENST00000614593 1267 ntBASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 DUX4L14-201ENST00000621227 1267 ntBASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV10-1A0A0K0K1A3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
TRBV10-1A0A0K0K1A3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 MIR219A2-201ENST00000608502 1504 ntBASIC17.26■□□□□ 0.35
TRBV10-1A0A0K0K1A3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-1A0A0K0K1A3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV10-1A0A0K0K1A3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV10-1A0A0K0K1A3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV10-1A0A0K0K1A3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV10-1A0A0K0K1A3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV10-1A0A0K0K1A3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.23■□□□□ 0.35
TRBV10-1A0A0K0K1A3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV10-1A0A0K0K1A3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 AC010501.1-201ENST00000606270 1962 ntBASIC17.22■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV10-1A0A0K0K1A3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRBV10-1A0A0K0K1A3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV10-1A0A0K0K1A3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV10-1A0A0K0K1A3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV10-1A0A0K0K1A3 AC020928.2-201ENST00000588717 2197 ntBASIC17.21■□□□□ 0.34
TRBV10-1A0A0K0K1A3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV10-1A0A0K0K1A3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV10-1A0A0K0K1A3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV10-1A0A0K0K1A3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV10-1A0A0K0K1A3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 ZNRF2P2-203ENST00000454624 420 ntBASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV10-1A0A0K0K1A3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 AC126177.7-201ENST00000547904 679 ntBASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV10-1A0A0K0K1A3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 AL359258.2-201ENST00000564063 1566 ntBASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV10-1A0A0K0K1A3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRBV10-1A0A0K0K1A3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV10-1A0A0K0K1A3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms