Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 WHAMMP3-201ENST00000611636 1609 ntBASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 AC021231.2-201ENST00000594613 730 ntBASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV6-7A0A0A0MS04 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBV6-7A0A0A0MS04 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV6-7A0A0A0MS04 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV6-7A0A0A0MS04 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.47■□□□□ 0.87
TRBV6-7A0A0A0MS04 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV6-7A0A0A0MS04 DUX4L29-201ENST00000425409 679 ntBASIC20.46■□□□□ 0.87
TRBV6-7A0A0A0MS04 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV6-7A0A0A0MS04 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV6-7A0A0A0MS04 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.44■□□□□ 0.86
TRBV6-7A0A0A0MS04 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 ERN1-208ENST00000606895 2068 ntBASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV6-7A0A0A0MS04 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRBV6-7A0A0A0MS04 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV6-7A0A0A0MS04 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV6-7A0A0A0MS04 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV6-7A0A0A0MS04 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-7A0A0A0MS04 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-7A0A0A0MS04 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV6-7A0A0A0MS04 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV6-7A0A0A0MS04 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.39■□□□□ 0.86
TRBV6-7A0A0A0MS04 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV6-7A0A0A0MS04 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-7A0A0A0MS04 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-7A0A0A0MS04 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-7A0A0A0MS04 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-7A0A0A0MS04 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV6-7A0A0A0MS04 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV6-7A0A0A0MS04 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV6-7A0A0A0MS04 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV6-7A0A0A0MS04 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms