Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TAF1C-209ENST00000564208 3810 ntTSL 28.66□□□□□ -1.025e-9■□□□□ 9.6
SRSF1Q07955 UTP4-205ENST00000563299 581 ntTSL 37.63□□□□□ -1.191e-7■□□□□ 9.6
SRSF1Q07955 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC5.45□□□□□ -1.541e-7■□□□□ 9.6
SRSF1Q07955 NKTR-207ENST00000460910 282 ntTSL 517.95■□□□□ 0.463e-7■□□□□ 9.6
SRSF1Q07955 NKTR-205ENST00000459950 2134 ntTSL 1 (best)13.94□□□□□ -0.183e-7■□□□□ 9.6
SRSF1Q07955 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC11.61□□□□□ -0.551e-6■□□□□ 9.6
SRSF1Q07955 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.23e-10■□□□□ 9.6
SRSF1Q07955 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.49□□□□□ -0.253e-10■□□□□ 9.6
SRSF1Q07955 SATB2-204ENST00000440919 2166 ntTSL 1 (best)13.4□□□□□ -0.263e-10■□□□□ 9.6
SRSF1Q07955 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.56□□□□□ -0.43e-10■□□□□ 9.6
SRSF1Q07955 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.483e-10■□□□□ 9.6
SRSF1Q07955 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.3□□□□□ -0.63e-10■□□□□ 9.6
SRSF1Q07955 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.613e-10■□□□□ 9.6
SRSF1Q07955 SATB2-207ENST00000463386 372 ntTSL 410.54□□□□□ -0.723e-10■□□□□ 9.6
SRSF1Q07955 ATL2-211ENST00000456736 578 ntTSL 316.5■□□□□ 0.231e-7■□□□□ 9.6
SRSF1Q07955 ATL2-208ENST00000449130 526 ntTSL 315.98■□□□□ 0.151e-7■□□□□ 9.6
SRSF1Q07955 ATL2-205ENST00000416222 593 ntTSL 415.58■□□□□ 0.081e-7■□□□□ 9.6
SRSF1Q07955 ATL2-212ENST00000472097 561 ntTSL 315.58■□□□□ 0.081e-7■□□□□ 9.6
SRSF1Q07955 ATL2-209ENST00000451483 576 ntTSL 412.98□□□□□ -0.331e-7■□□□□ 9.6
SRSF1Q07955 ATL2-203ENST00000405384 1905 ntTSL 1 (best)11.97□□□□□ -0.491e-7■□□□□ 9.6
SRSF1Q07955 ATL2-207ENST00000443098 775 ntTSL 511.73□□□□□ -0.531e-7■□□□□ 9.6
SRSF1Q07955 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC10.97□□□□□ -0.651e-7■□□□□ 9.6
SRSF1Q07955 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.79□□□□□ -0.681e-7■□□□□ 9.6
SRSF1Q07955 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.721e-7■□□□□ 9.6
SRSF1Q07955 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.97□□□□□ -1.613e-7■□□□□ 9.6
SRSF1Q07955 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.663e-7■□□□□ 9.6
SRSF1Q07955 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.21□□□□□ -1.743e-7■□□□□ 9.6
SRSF1Q07955 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.61□□□□□ -1.833e-7■□□□□ 9.6
SRSF1Q07955 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.812e-8■□□□□ 9.6
SRSF1Q07955 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.022e-8■□□□□ 9.6
SRSF1Q07955 EIF1-204ENST00000469308 815 ntTSL 221.22■□□□□ 0.992e-8■□□□□ 9.6
SRSF1Q07955 EIF1-202ENST00000462917 2170 ntTSL 1 (best)14.79□□□□□ -0.042e-8■□□□□ 9.6
SRSF1Q07955 EIF1-201ENST00000310837 1120 ntTSL 1 (best)8.45□□□□□ -1.062e-8■□□□□ 9.6
SRSF1Q07955 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.81□□□□□ -1.322e-8■□□□□ 9.6
SRSF1Q07955 EIF1-205ENST00000482111 1428 ntTSL 26.72□□□□□ -1.332e-8■□□□□ 9.6
SRSF1Q07955 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.452e-8■□□□□ 9.6
SRSF1Q07955 EIF4A2-216ENST00000468362 1356 ntTSL 25.79□□□□□ -1.483e-14■□□□□ 9.6
SRSF1Q07955 EIF4A2-222ENST00000492144 993 ntTSL 25.01□□□□□ -1.613e-14■□□□□ 9.6
SRSF1Q07955 EIF4A2-226ENST00000497177 849 ntTSL 54.95□□□□□ -1.623e-14■□□□□ 9.6
SRSF1Q07955 EIF4A2-217ENST00000475409 802 ntTSL 24.67□□□□□ -1.663e-14■□□□□ 9.6
SRSF1Q07955 EIF4A2-213ENST00000465792 734 ntTSL 23.99□□□□□ -1.773e-14■□□□□ 9.6
SRSF1Q07955 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 519.88■□□□□ 0.773e-6■□□□□ 9.6
SRSF1Q07955 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.573e-6■□□□□ 9.6
SRSF1Q07955 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.433e-6■□□□□ 9.6
SRSF1Q07955 AL121845.2-202ENST00000476221 446 ntTSL 516.81■□□□□ 0.283e-6■□□□□ 9.6
SRSF1Q07955 LIME1-210ENST00000621325 2410 ntTSL 216.61■□□□□ 0.253e-6■□□□□ 9.6
SRSF1Q07955 LIME1-209ENST00000494776 391 ntTSL 514.64□□□□□ -0.073e-6■□□□□ 9.6
SRSF1Q07955 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.093e-6■□□□□ 9.6
SRSF1Q07955 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.91□□□□□ -0.349e-7■□□□□ 9.6
SRSF1Q07955 CRACR2B-205ENST00000527763 1728 ntTSL 224.26■■□□□ 1.475e-8■□□□□ 9.6
SRSF1Q07955 CRACR2B-210ENST00000530688 1623 ntTSL 219.11■□□□□ 0.655e-8■□□□□ 9.6
SRSF1Q07955 CRACR2B-208ENST00000528694 2440 ntTSL 216.56■□□□□ 0.245e-8■□□□□ 9.6
SRSF1Q07955 CRACR2B-203ENST00000526531 714 ntTSL 315.38■□□□□ 0.055e-8■□□□□ 9.6
SRSF1Q07955 BCL2L2-202ENST00000553824 548 ntTSL 411.42□□□□□ -0.588e-8■□□□□ 9.6
SRSF1Q07955 PRKAB2-202ENST00000474939 578 ntTSL 411.35□□□□□ -0.598e-8■□□□□ 9.6
SRSF1Q07955 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.788e-8■□□□□ 9.6
SRSF1Q07955 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.66□□□□□ -0.544e-9■□□□□ 9.6
SRSF1Q07955 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.94e-9■□□□□ 9.6
SRSF1Q07955 RASGRF2-203ENST00000503795 3837 ntTSL 1 (best)8.8□□□□□ -14e-9■□□□□ 9.6
SRSF1Q07955 DUS1L-211ENST00000578907 1084 ntTSL 325.91■■□□□ 1.743e-9■□□□□ 9.5
SRSF1Q07955 DUS1L-207ENST00000578176 937 ntTSL 524.75■■□□□ 1.553e-9■□□□□ 9.5
SRSF1Q07955 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.13e-9■□□□□ 9.5
SRSF1Q07955 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.363e-9■□□□□ 9.5
SRSF1Q07955 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.813e-9■□□□□ 9.5
SRSF1Q07955 SUPT5H-214ENST00000598786 238 ntTSL 57.46□□□□□ -1.226e-9■□□□□ 9.5
SRSF1Q07955 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.293e-7■□□□□ 9.5
SRSF1Q07955 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.013e-7■□□□□ 9.5
SRSF1Q07955 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.883e-7■□□□□ 9.5
SRSF1Q07955 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.68■□□□□ 0.743e-9■□□□□ 9.5
SRSF1Q07955 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.63e-7■□□□□ 9.5
SRSF1Q07955 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.573e-9■□□□□ 9.5
SRSF1Q07955 ATP2A2-203ENST00000377685 5702 ntTSL 518.02■□□□□ 0.479e-7■□□□□ 9.5
SRSF1Q07955 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.453e-9■□□□□ 9.5
SRSF1Q07955 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.443e-9■□□□□ 9.5
SRSF1Q07955 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.363e-7■□□□□ 9.5
SRSF1Q07955 SLC6A8-203ENST00000429147 334 ntTSL 215.64■□□□□ 0.091e-8■□□□□ 9.5
SRSF1Q07955 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.059e-7■□□□□ 9.5
SRSF1Q07955 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.173e-7■□□□□ 9.5
SRSF1Q07955 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.293e-7■□□□□ 9.5
SRSF1Q07955 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.363e-7■□□□□ 9.5
SRSF1Q07955 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.449e-7■□□□□ 9.5
SRSF1Q07955 PCM1-204ENST00000517730 2536 ntTSL 1 (best)11.98□□□□□ -0.494e-9■□□□□ 9.5
SRSF1Q07955 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.514e-9■□□□□ 9.5
SRSF1Q07955 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.67□□□□□ -0.544e-9■□□□□ 9.5
SRSF1Q07955 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.63e-9■□□□□ 9.5
SRSF1Q07955 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC11.32□□□□□ -0.63e-9■□□□□ 9.5
SRSF1Q07955 CDC16-208ENST00000484907 1038 ntTSL 38.34□□□□□ -1.073e-9■□□□□ 9.5
SRSF1Q07955 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.093e-7■□□□□ 9.5
SRSF1Q07955 PTTG1-203ENST00000517480 684 ntTSL 57.18□□□□□ -1.263e-7■□□□□ 9.5
SRSF1Q07955 PTTG1-204ENST00000519287 670 ntTSL 57.06□□□□□ -1.283e-7■□□□□ 9.5
SRSF1Q07955 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC6.87□□□□□ -1.314e-9■□□□□ 9.5
SRSF1Q07955 PTTG1-207ENST00000524244 434 ntTSL 26.1□□□□□ -1.433e-7■□□□□ 9.5
SRSF1Q07955 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.43□□□□□ -1.543e-9■□□□□ 9.5
SRSF1Q07955 PTTG1-206ENST00000523659 851 ntTSL 25.11□□□□□ -1.593e-7■□□□□ 9.5
SRSF1Q07955 PCM1-205ENST00000517836 580 ntTSL 35.02□□□□□ -1.614e-9■□□□□ 9.5
SRSF1Q07955 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.17□□□□□ -2.064e-9■□□□□ 9.5
SRSF1Q07955 CCDC137-204ENST00000574107 890 ntAPPRIS ALT2 TSL 319.93■□□□□ 0.781e-9■□□□□ 9.5
SRSF1Q07955 CCDC137-205ENST00000574200 437 ntTSL 219.82■□□□□ 0.761e-9■□□□□ 9.5
SRSF1Q07955 CCDC137-206ENST00000575223 1888 ntTSL 517.67■□□□□ 0.421e-9■□□□□ 9.5
SRSF1Q07955 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.138e-7■□□□□ 9.5
Retrieved 100 of 14,836 protein–RNA pairs in 358.2 ms