RNA–Protein interactions for RNA: ENST00000405384.6

ATL2-203, Transcript of atlastin GTPase 2, humanhuman

TSL 1 (best)

Gene ATL2, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-203ENST00000405384 NISCHQ9Y2I1 1504 aa32.03■■■□□ 2.72
ATL2-203ENST00000405384 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
ATL2-203ENST00000405384 ABCC9O60706 1549 aa27.38■■□□□ 1.97
ATL2-203ENST00000405384 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
ATL2-203ENST00000405384 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
ATL2-203ENST00000405384 NACADO15069 1562 aa26.47■■□□□ 1.83
ATL2-203ENST00000405384 DCAF1Q9Y4B6 1507 aa26.45■■□□□ 1.83
ATL2-203ENST00000405384 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
ATL2-203ENST00000405384 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
ATL2-203ENST00000405384 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
ATL2-203ENST00000405384 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
ATL2-203ENST00000405384 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.7
ATL2-203ENST00000405384 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
ATL2-203ENST00000405384 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
ATL2-203ENST00000405384 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
ATL2-203ENST00000405384 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
ATL2-203ENST00000405384 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
ATL2-203ENST00000405384 BAZ1AQ9NRL2 1556 aaPredicted RBP24.77■■□□□ 1.56
ATL2-203ENST00000405384 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
ATL2-203ENST00000405384 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
ATL2-203ENST00000405384 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
ATL2-203ENST00000405384 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
ATL2-203ENST00000405384 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
ATL2-203ENST00000405384 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
ATL2-203ENST00000405384 WIZO95785 1651 aa24.48■■□□□ 1.51
ATL2-203ENST00000405384 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
ATL2-203ENST00000405384 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
ATL2-203ENST00000405384 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
ATL2-203ENST00000405384 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
ATL2-203ENST00000405384 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
ATL2-203ENST00000405384 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
ATL2-203ENST00000405384 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
ATL2-203ENST00000405384 NESP48681 1621 aa23.82■■□□□ 1.4
ATL2-203ENST00000405384 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
ATL2-203ENST00000405384 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
ATL2-203ENST00000405384 CFTRP13569 1480 aa23.71■■□□□ 1.39
ATL2-203ENST00000405384 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
ATL2-203ENST00000405384 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
ATL2-203ENST00000405384 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
ATL2-203ENST00000405384 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
ATL2-203ENST00000405384 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
ATL2-203ENST00000405384 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
ATL2-203ENST00000405384 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
ATL2-203ENST00000405384 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
ATL2-203ENST00000405384 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
ATL2-203ENST00000405384 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
ATL2-203ENST00000405384 WDR62O43379 1518 aa23.21■■□□□ 1.31
ATL2-203ENST00000405384 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
ATL2-203ENST00000405384 CUX1P39880 1505 aa23.17■■□□□ 1.3
ATL2-203ENST00000405384 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
ATL2-203ENST00000405384 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
ATL2-203ENST00000405384 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
ATL2-203ENST00000405384 CUX2O14529 1486 aa23.09■■□□□ 1.29
ATL2-203ENST00000405384 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
ATL2-203ENST00000405384 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
ATL2-203ENST00000405384 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
ATL2-203ENST00000405384 POLA1P09884 1462 aaPredicted RBP23.02■■□□□ 1.27
ATL2-203ENST00000405384 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
ATL2-203ENST00000405384 SOGA1O94964 1423 aa22.93■■□□□ 1.26
ATL2-203ENST00000405384 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
ATL2-203ENST00000405384 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
ATL2-203ENST00000405384 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
ATL2-203ENST00000405384 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
ATL2-203ENST00000405384 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
ATL2-203ENST00000405384 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
ATL2-203ENST00000405384 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
ATL2-203ENST00000405384 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
ATL2-203ENST00000405384 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.244e-7■■■□□ 18.6
ATL2-203ENST00000405384 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
ATL2-203ENST00000405384 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
ATL2-203ENST00000405384 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
ATL2-203ENST00000405384 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
ATL2-203ENST00000405384 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
ATL2-203ENST00000405384 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
ATL2-203ENST00000405384 PBRM1Q86U86 1689 aa22.57■■□□□ 1.2
ATL2-203ENST00000405384 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
ATL2-203ENST00000405384 IGF1RP08069 1367 aa22.52■■□□□ 1.19
ATL2-203ENST00000405384 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
ATL2-203ENST00000405384 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
ATL2-203ENST00000405384 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
ATL2-203ENST00000405384 FBLN2P98095 1184 aa22.44■■□□□ 1.18
ATL2-203ENST00000405384 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
ATL2-203ENST00000405384 EEA1Q15075 1411 aa22.41■■□□□ 1.18
ATL2-203ENST00000405384 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
ATL2-203ENST00000405384 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
ATL2-203ENST00000405384 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
ATL2-203ENST00000405384 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
ATL2-203ENST00000405384 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.17
ATL2-203ENST00000405384 CUL7Q14999 1698 aa22.36■■□□□ 1.17
ATL2-203ENST00000405384 CHD1O14646 1710 aa22.36■■□□□ 1.17
ATL2-203ENST00000405384 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
ATL2-203ENST00000405384 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
ATL2-203ENST00000405384 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
ATL2-203ENST00000405384 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
ATL2-203ENST00000405384 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
ATL2-203ENST00000405384 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
ATL2-203ENST00000405384 NUP160Q12769 1436 aa22.19■■□□□ 1.14
ATL2-203ENST00000405384 KIF21BO75037 1637 aa22.17■■□□□ 1.14
ATL2-203ENST00000405384 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
ATL2-203ENST00000405384 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms