RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
SATB2-204ENST00000440919 CCDC180Q9P1Z9 1646 aa31.74■■■□□ 2.67
SATB2-204ENST00000440919 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
SATB2-204ENST00000440919 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
SATB2-204ENST00000440919 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
SATB2-204ENST00000440919 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
SATB2-204ENST00000440919 DCAF1Q9Y4B6 1507 aa30.26■■■□□ 2.44
SATB2-204ENST00000440919 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
SATB2-204ENST00000440919 ABCC9O60706 1549 aa29.75■■■□□ 2.35
SATB2-204ENST00000440919 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
SATB2-204ENST00000440919 NACADO15069 1562 aa29.49■■■□□ 2.31
SATB2-204ENST00000440919 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
SATB2-204ENST00000440919 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
SATB2-204ENST00000440919 HRCP23327 699 aa29.05■■■□□ 2.24
SATB2-204ENST00000440919 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
SATB2-204ENST00000440919 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
SATB2-204ENST00000440919 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
SATB2-204ENST00000440919 UNC13AQ9UPW8 1703 aa28.58■■■□□ 2.17
SATB2-204ENST00000440919 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
SATB2-204ENST00000440919 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
SATB2-204ENST00000440919 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
SATB2-204ENST00000440919 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
SATB2-204ENST00000440919 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
SATB2-204ENST00000440919 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.12
SATB2-204ENST00000440919 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
SATB2-204ENST00000440919 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
SATB2-204ENST00000440919 WIZO95785 1651 aa28.14■■■□□ 2.1
SATB2-204ENST00000440919 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
SATB2-204ENST00000440919 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
SATB2-204ENST00000440919 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
SATB2-204ENST00000440919 ZEB1P37275 1124 aaPredicted RBP27.82■■■□□ 2.04
SATB2-204ENST00000440919 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
SATB2-204ENST00000440919 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
SATB2-204ENST00000440919 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.02
SATB2-204ENST00000440919 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
SATB2-204ENST00000440919 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
SATB2-204ENST00000440919 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
SATB2-204ENST00000440919 ABCC8Q09428 1581 aa27.53■■■□□ 2
SATB2-204ENST00000440919 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
SATB2-204ENST00000440919 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
SATB2-204ENST00000440919 SOGA1O94964 1423 aa27.28■■□□□ 1.96
SATB2-204ENST00000440919 CEP162Q5TB80 1403 aa27.25■■□□□ 1.95
SATB2-204ENST00000440919 EEA1Q15075 1411 aa27.23■■□□□ 1.95
SATB2-204ENST00000440919 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
SATB2-204ENST00000440919 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
SATB2-204ENST00000440919 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
SATB2-204ENST00000440919 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.93
SATB2-204ENST00000440919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.93
SATB2-204ENST00000440919 CSRNP3Q8WYN3 585 aa27.11■■□□□ 1.93
SATB2-204ENST00000440919 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
SATB2-204ENST00000440919 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
SATB2-204ENST00000440919 UBTFP17480 764 aaKnown RBP26.96■■□□□ 1.91
SATB2-204ENST00000440919 SYNJ1O43426 1573 aa26.95■■□□□ 1.91
SATB2-204ENST00000440919 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
SATB2-204ENST00000440919 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
SATB2-204ENST00000440919 KIF21BO75037 1637 aa26.89■■□□□ 1.9
SATB2-204ENST00000440919 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
SATB2-204ENST00000440919 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
SATB2-204ENST00000440919 CFTRP13569 1480 aa26.73■■□□□ 1.87
SATB2-204ENST00000440919 CLIP1P30622 1438 aa26.7■■□□□ 1.86
SATB2-204ENST00000440919 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
SATB2-204ENST00000440919 TOP2BQ02880 1626 aa26.64■■□□□ 1.86
SATB2-204ENST00000440919 VPS8Q8N3P4 1428 aa26.63■■□□□ 1.85
SATB2-204ENST00000440919 RAPGEF2Q9Y4G8 1499 aa26.63■■□□□ 1.85
SATB2-204ENST00000440919 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
SATB2-204ENST00000440919 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
SATB2-204ENST00000440919 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
SATB2-204ENST00000440919 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
SATB2-204ENST00000440919 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
SATB2-204ENST00000440919 CUX1P39880 1505 aa26.46■■□□□ 1.83
SATB2-204ENST00000440919 PELP1Q8IZL8 1130 aaKnown RBP26.45■■□□□ 1.82
SATB2-204ENST00000440919 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
SATB2-204ENST00000440919 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
SATB2-204ENST00000440919 HNRNPUL2Q1KMD3 747 aaKnown RBP26.43■■□□□ 1.82
SATB2-204ENST00000440919 PRXQ9BXM0 1461 aa26.4■■□□□ 1.82
SATB2-204ENST00000440919 APLP2Q06481 763 aa26.39■■□□□ 1.82
SATB2-204ENST00000440919 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
SATB2-204ENST00000440919 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
SATB2-204ENST00000440919 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
SATB2-204ENST00000440919 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
SATB2-204ENST00000440919 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
SATB2-204ENST00000440919 NESP48681 1621 aa26.23■■□□□ 1.79
SATB2-204ENST00000440919 GTF3C3Q9Y5Q9 886 aa26.2■■□□□ 1.79
SATB2-204ENST00000440919 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
SATB2-204ENST00000440919 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
SATB2-204ENST00000440919 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
SATB2-204ENST00000440919 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
SATB2-204ENST00000440919 CLSPNQ9HAW4 1339 aa26.09■■□□□ 1.77
SATB2-204ENST00000440919 KANK4Q5T7N3 995 aaPredicted RBP26.09■■□□□ 1.77
SATB2-204ENST00000440919 PDS5BQ9NTI5 1447 aa26.06■■□□□ 1.76
SATB2-204ENST00000440919 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
SATB2-204ENST00000440919 RRBP1Q9P2E9 1410 aaKnown RBP26.06■■□□□ 1.76
SATB2-204ENST00000440919 MIER1Q8N108 512 aa26.05■■□□□ 1.76
SATB2-204ENST00000440919 CUX2O14529 1486 aa26.04■■□□□ 1.76
SATB2-204ENST00000440919 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
SATB2-204ENST00000440919 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
SATB2-204ENST00000440919 YTHDC1Q96MU7 727 aaKnown RBP25.96■■□□□ 1.75
SATB2-204ENST00000440919 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
SATB2-204ENST00000440919 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
SATB2-204ENST00000440919 IGF1RP08069 1367 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms