RNA–Protein interactions for RNA: ENST00000563094.5

UTP4-204, Transcript of UTP4, small subunit processome component, humanhuman

TSL 2 BASIC

Gene UTP4, Length 4,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-204ENST00000563094 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
UTP4-204ENST00000563094 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
UTP4-204ENST00000563094 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
UTP4-204ENST00000563094 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
UTP4-204ENST00000563094 ABCC9O60706 1549 aa11.99□□□□□ -0.49
UTP4-204ENST00000563094 CCDC180Q9P1Z9 1646 aa11.98□□□□□ -0.49
UTP4-204ENST00000563094 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
UTP4-204ENST00000563094 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
UTP4-204ENST00000563094 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
UTP4-204ENST00000563094 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
UTP4-204ENST00000563094 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
UTP4-204ENST00000563094 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
UTP4-204ENST00000563094 CHIC1Q5VXU3 224 aa11.46□□□□□ -0.57
UTP4-204ENST00000563094 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
UTP4-204ENST00000563094 NACADO15069 1562 aa11.4□□□□□ -0.58
UTP4-204ENST00000563094 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
UTP4-204ENST00000563094 LOC105371045A0A1W2PR82 267 aa11.26□□□□□ -0.61
UTP4-204ENST00000563094 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
UTP4-204ENST00000563094 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
UTP4-204ENST00000563094 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
UTP4-204ENST00000563094 RSF1Q96T23 1441 aaPredicted RBP11.22□□□□□ -0.61
UTP4-204ENST00000563094 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
UTP4-204ENST00000563094 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
UTP4-204ENST00000563094 APLP2Q06481 763 aa11.19□□□□□ -0.62
UTP4-204ENST00000563094 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.62
UTP4-204ENST00000563094 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
UTP4-204ENST00000563094 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
UTP4-204ENST00000563094 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
UTP4-204ENST00000563094 ATP1B4Q9UN42 357 aaPredicted RBP11.01□□□□□ -0.65
UTP4-204ENST00000563094 BAZ1BQ9UIG0 1483 aaKnown RBP10.95□□□□□ -0.66
UTP4-204ENST00000563094 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
UTP4-204ENST00000563094 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
UTP4-204ENST00000563094 WIZO95785 1651 aa10.89□□□□□ -0.67
UTP4-204ENST00000563094 CCER1Q8TC90 406 aaPredicted RBP10.85□□□□□ -0.67
UTP4-204ENST00000563094 CCDC88BA6NC98 1476 aa10.82□□□□□ -0.68
UTP4-204ENST00000563094 SMARCA4P51532 1647 aa10.82□□□□□ -0.68
UTP4-204ENST00000563094 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
UTP4-204ENST00000563094 SMARCA2P51531 1590 aa10.79□□□□□ -0.68
UTP4-204ENST00000563094 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
UTP4-204ENST00000563094 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.69
UTP4-204ENST00000563094 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
UTP4-204ENST00000563094 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
UTP4-204ENST00000563094 ITGAEP38570 1179 aa10.73□□□□□ -0.69
UTP4-204ENST00000563094 HRCP23327 699 aa10.72□□□□□ -0.69
UTP4-204ENST00000563094 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
UTP4-204ENST00000563094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.71□□□□□ -0.69
UTP4-204ENST00000563094 FBLN2P98095 1184 aa10.69□□□□□ -0.7
UTP4-204ENST00000563094 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
UTP4-204ENST00000563094 EEA1Q15075 1411 aa10.67□□□□□ -0.7
UTP4-204ENST00000563094 SOGA1O94964 1423 aa10.65□□□□□ -0.7
UTP4-204ENST00000563094 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.71
UTP4-204ENST00000563094 EIF4G1Q04637 1599 aaKnown RBP10.62□□□□□ -0.71
UTP4-204ENST00000563094 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
UTP4-204ENST00000563094 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
UTP4-204ENST00000563094 CEP162Q5TB80 1403 aa10.59□□□□□ -0.71
UTP4-204ENST00000563094 CLIP1P30622 1438 aa10.58□□□□□ -0.72
UTP4-204ENST00000563094 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
UTP4-204ENST00000563094 UNC13AQ9UPW8 1703 aa10.57□□□□□ -0.72
UTP4-204ENST00000563094 CADPSQ9ULU8 1353 aa10.57□□□□□ -0.72
UTP4-204ENST00000563094 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
UTP4-204ENST00000563094 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
UTP4-204ENST00000563094 TNIKQ9UKE5 1360 aa10.55□□□□□ -0.72
UTP4-204ENST00000563094 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
UTP4-204ENST00000563094 CUX2O14529 1486 aa10.53□□□□□ -0.72
UTP4-204ENST00000563094 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
UTP4-204ENST00000563094 PDS5BQ9NTI5 1447 aa10.49□□□□□ -0.73
UTP4-204ENST00000563094 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
UTP4-204ENST00000563094 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
UTP4-204ENST00000563094 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
UTP4-204ENST00000563094 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
UTP4-204ENST00000563094 CC2D2AQ9P2K1 1620 aa10.44□□□□□ -0.74
UTP4-204ENST00000563094 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
UTP4-204ENST00000563094 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
UTP4-204ENST00000563094 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
UTP4-204ENST00000563094 TDRD9Q8NDG6 1382 aaKnown RBP10.42□□□□□ -0.74
UTP4-204ENST00000563094 CFTRP13569 1480 aa10.39□□□□□ -0.75
UTP4-204ENST00000563094 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
UTP4-204ENST00000563094 PEG3Q9GZU2 1588 aa10.38□□□□□ -0.75
UTP4-204ENST00000563094 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
UTP4-204ENST00000563094 TRIM52Q96A61 297 aa10.37□□□□□ -0.75
UTP4-204ENST00000563094 MTUS2Q5JR59 1369 aa10.36□□□□□ -0.75
UTP4-204ENST00000563094 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
UTP4-204ENST00000563094 NESP48681 1621 aa10.35□□□□□ -0.75
UTP4-204ENST00000563094 NEUROD1Q13562 356 aa10.35□□□□□ -0.75
UTP4-204ENST00000563094 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
UTP4-204ENST00000563094 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
UTP4-204ENST00000563094 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
UTP4-204ENST00000563094 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
UTP4-204ENST00000563094 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
UTP4-204ENST00000563094 YTHDC1Q96MU7 727 aaKnown RBP10.3□□□□□ -0.76
UTP4-204ENST00000563094 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
UTP4-204ENST00000563094 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
UTP4-204ENST00000563094 IGF1RP08069 1367 aa10.28□□□□□ -0.76
UTP4-204ENST00000563094 CUX1P39880 1505 aa10.27□□□□□ -0.77
UTP4-204ENST00000563094 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.77
UTP4-204ENST00000563094 TOP2BQ02880 1626 aa10.26□□□□□ -0.77
UTP4-204ENST00000563094 DIEXFQ68CQ4 756 aaKnown RBP10.26□□□□□ -0.77
UTP4-204ENST00000563094 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
UTP4-204ENST00000563094 POLR3GLQ9BT43 218 aa10.23□□□□□ -0.77
UTP4-204ENST00000563094 FHOD3Q2V2M9 1422 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms