RNA–Protein interactions for RNA: ENST00000396680.2

ATF4-202, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-202ENST00000396680 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
ATF4-202ENST00000396680 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
ATF4-202ENST00000396680 ABCC9O60706 1549 aa29.33■■■□□ 2.29
ATF4-202ENST00000396680 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
ATF4-202ENST00000396680 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
ATF4-202ENST00000396680 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
ATF4-202ENST00000396680 NACADO15069 1562 aa28.18■■■□□ 2.1
ATF4-202ENST00000396680 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
ATF4-202ENST00000396680 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
ATF4-202ENST00000396680 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
ATF4-202ENST00000396680 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
ATF4-202ENST00000396680 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
ATF4-202ENST00000396680 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
ATF4-202ENST00000396680 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
ATF4-202ENST00000396680 DNAJC5BQ9UF47 199 aa26.77■■□□□ 1.88
ATF4-202ENST00000396680 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
ATF4-202ENST00000396680 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
ATF4-202ENST00000396680 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
ATF4-202ENST00000396680 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
ATF4-202ENST00000396680 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
ATF4-202ENST00000396680 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
ATF4-202ENST00000396680 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
ATF4-202ENST00000396680 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
ATF4-202ENST00000396680 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
ATF4-202ENST00000396680 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
ATF4-202ENST00000396680 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
ATF4-202ENST00000396680 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
ATF4-202ENST00000396680 WIZO95785 1651 aa25.82■■□□□ 1.72
ATF4-202ENST00000396680 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
ATF4-202ENST00000396680 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
ATF4-202ENST00000396680 NESP48681 1621 aa25.4■■□□□ 1.66
ATF4-202ENST00000396680 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
ATF4-202ENST00000396680 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
ATF4-202ENST00000396680 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
ATF4-202ENST00000396680 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
ATF4-202ENST00000396680 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
ATF4-202ENST00000396680 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
ATF4-202ENST00000396680 CFTRP13569 1480 aa25.14■■□□□ 1.61
ATF4-202ENST00000396680 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
ATF4-202ENST00000396680 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
ATF4-202ENST00000396680 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
ATF4-202ENST00000396680 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
ATF4-202ENST00000396680 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
ATF4-202ENST00000396680 CUX2O14529 1486 aa24.92■■□□□ 1.58
ATF4-202ENST00000396680 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
ATF4-202ENST00000396680 WDR62O43379 1518 aa24.8■■□□□ 1.56
ATF4-202ENST00000396680 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
ATF4-202ENST00000396680 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
ATF4-202ENST00000396680 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
ATF4-202ENST00000396680 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.53
ATF4-202ENST00000396680 CUX1P39880 1505 aa24.46■■□□□ 1.51
ATF4-202ENST00000396680 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
ATF4-202ENST00000396680 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
ATF4-202ENST00000396680 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.49
ATF4-202ENST00000396680 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
ATF4-202ENST00000396680 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
ATF4-202ENST00000396680 SOGA1O94964 1423 aa24.32■■□□□ 1.48
ATF4-202ENST00000396680 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
ATF4-202ENST00000396680 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
ATF4-202ENST00000396680 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
ATF4-202ENST00000396680 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
ATF4-202ENST00000396680 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
ATF4-202ENST00000396680 EIF4G3O43432 1585 aaKnown RBP24.24■■□□□ 1.47
ATF4-202ENST00000396680 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.473e-11■■■■■ 47.8
ATF4-202ENST00000396680 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
ATF4-202ENST00000396680 WDR97A6NE52 1622 aa24.14■■□□□ 1.45
ATF4-202ENST00000396680 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
ATF4-202ENST00000396680 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
ATF4-202ENST00000396680 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
ATF4-202ENST00000396680 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
ATF4-202ENST00000396680 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
ATF4-202ENST00000396680 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
ATF4-202ENST00000396680 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
ATF4-202ENST00000396680 FBLN2P98095 1184 aa23.96■■□□□ 1.43
ATF4-202ENST00000396680 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
ATF4-202ENST00000396680 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
ATF4-202ENST00000396680 CHD1O14646 1710 aa23.9■■□□□ 1.42
ATF4-202ENST00000396680 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
ATF4-202ENST00000396680 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
ATF4-202ENST00000396680 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
ATF4-202ENST00000396680 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
ATF4-202ENST00000396680 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
ATF4-202ENST00000396680 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
ATF4-202ENST00000396680 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
ATF4-202ENST00000396680 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
ATF4-202ENST00000396680 IGF1RP08069 1367 aa23.7■■□□□ 1.39
ATF4-202ENST00000396680 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
ATF4-202ENST00000396680 CUL7Q14999 1698 aa23.65■■□□□ 1.38
ATF4-202ENST00000396680 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
ATF4-202ENST00000396680 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
ATF4-202ENST00000396680 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
ATF4-202ENST00000396680 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
ATF4-202ENST00000396680 NUP160Q12769 1436 aa23.57■■□□□ 1.36
ATF4-202ENST00000396680 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
ATF4-202ENST00000396680 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
ATF4-202ENST00000396680 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
ATF4-202ENST00000396680 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
ATF4-202ENST00000396680 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
ATF4-202ENST00000396680 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
ATF4-202ENST00000396680 EEA1Q15075 1411 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms