RNA–Protein interactions for RNA: ENST00000492144.5

EIF4A2-222, Transcript of eukaryotic translation initiation factor 4A2, human

TSL 2

Gene EIF4A2, Length 993 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A2-222	ENST00000492144	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.26	■□□□□ 0.99
EIF4A2-222	ENST00000492144	CHIC1	Q5VXU3	224 aa		21.12	■□□□□ 0.97
EIF4A2-222	ENST00000492144	PHF23	Q9BUL5	403 aa	Predicted RBP	18.62	■□□□□ 0.57
EIF4A2-222	ENST00000492144	SENP3	Q9H4L4	574 aa	Predicted RBP	17.97	■□□□□ 0.47
EIF4A2-222	ENST00000492144	PLPPR3	Q6T4P5	718 aa		17.31	■□□□□ 0.36
EIF4A2-222	ENST00000492144	FOXD1	Q16676	465 aa		16.64	■□□□□ 0.25
EIF4A2-222	ENST00000492144	ADRA2B	P18089	450 aa		16.31	■□□□□ 0.2
EIF4A2-222	ENST00000492144	PPP6R1	Q9UPN7	881 aa		16.3	■□□□□ 0.2
EIF4A2-222	ENST00000492144	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.77	■□□□□ 0.12
EIF4A2-222	ENST00000492144	KCNA4	P22459	653 aa		15.38	■□□□□ 0.05
EIF4A2-222	ENST00000492144	PPP4R3CP	Q6ZMV5	832 aa		15.31	■□□□□ 0.04
EIF4A2-222	ENST00000492144	MSH5	O43196	834 aa		15.18	■□□□□ 0.02
EIF4A2-222	ENST00000492144	NCBP3	Q53F19	620 aa	Known RBP	15	□□□□□ -0.01
EIF4A2-222	ENST00000492144	SCAF1	Q9H7N4	1312 aa	Known RBP	14.91	□□□□□ -0.02
EIF4A2-222	ENST00000492144	NPM3	O75607	178 aa	Known RBP	14.8	□□□□□ -0.04
EIF4A2-222	ENST00000492144	CNKSR2	Q8WXI2	1034 aa		14.79	□□□□□ -0.04
EIF4A2-222	ENST00000492144	EHMT2	Q96KQ7	1210 aa		14.71	□□□□□ -0.05
EIF4A2-222	ENST00000492144	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.71	□□□□□ -0.05
EIF4A2-222	ENST00000492144	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.69	□□□□□ -0.06
EIF4A2-222	ENST00000492144	RNF216	Q9NWF9	866 aa	Predicted RBP	14.41	□□□□□ -0.1
EIF4A2-222	ENST00000492144	DMRT2	Q9Y5R5	561 aa		14.41	□□□□□ -0.1
EIF4A2-222	ENST00000492144	CSRNP3	Q8WYN3	585 aa		14.39	□□□□□ -0.11
EIF4A2-222	ENST00000492144	DNAJC5B	Q9UF47	199 aa		14.32	□□□□□ -0.12
EIF4A2-222	ENST00000492144	HOXD11	P31277	338 aa	Predicted RBP	14.26	□□□□□ -0.13
EIF4A2-222	ENST00000492144	ZBTB22	O15209	634 aa		14.16	□□□□□ -0.14
EIF4A2-222	ENST00000492144	FOXD4L1	Q9NU39	408 aa		14.04	□□□□□ -0.16
EIF4A2-222	ENST00000492144	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
EIF4A2-222	ENST00000492144	DCAF8L1	A6NGE4	600 aa		13.75	□□□□□ -0.21
EIF4A2-222	ENST00000492144	MYCN	P04198	464 aa	Predicted RBP	13.67	□□□□□ -0.22
EIF4A2-222	ENST00000492144	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	4e-9	■□□□□ 10.4
EIF4A2-222	ENST00000492144	ATXN8OS	P0DMR3	200 aa		13.52	□□□□□ -0.25
EIF4A2-222	ENST00000492144		U3KPZ7	1027 aa	Predicted RBP	13.42	□□□□□ -0.26
EIF4A2-222	ENST00000492144	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.35	□□□□□ -0.27
EIF4A2-222	ENST00000492144	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.35	□□□□□ -0.27
EIF4A2-222	ENST00000492144	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.32	□□□□□ -0.28
EIF4A2-222	ENST00000492144	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.28	□□□□□ -0.28
EIF4A2-222	ENST00000492144	POTED	Q86YR6	584 aa		13.18	□□□□□ -0.3
EIF4A2-222	ENST00000492144	APLP2	Q06481	763 aa		13.13	□□□□□ -0.31
EIF4A2-222	ENST00000492144	NISCH	Q9Y2I1	1504 aa		13.08	□□□□□ -0.32
EIF4A2-222	ENST00000492144	RNF39	Q9H2S5	420 aa		13.06	□□□□□ -0.32
EIF4A2-222	ENST00000492144	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.02	□□□□□ -0.33
EIF4A2-222	ENST00000492144	FKBP8	Q14318	412 aa		12.97	□□□□□ -0.33
EIF4A2-222	ENST00000492144	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.93	□□□□□ -0.34
EIF4A2-222	ENST00000492144	C1QBP	Q07021	282 aa	Known RBP	12.91	□□□□□ -0.34
EIF4A2-222	ENST00000492144	TRH	P20396	242 aa	Predicted RBP	12.88	□□□□□ -0.35
EIF4A2-222	ENST00000492144	CAPN15	O75808	1086 aa		12.84	□□□□□ -0.35
EIF4A2-222	ENST00000492144	POLA2	Q14181	598 aa		12.75	□□□□□ -0.37
EIF4A2-222	ENST00000492144	MKRN4P	Q13434	485 aa	Predicted RBP	12.72	□□□□□ -0.37
EIF4A2-222	ENST00000492144	FBLN2	P98095	1184 aa		12.68	□□□□□ -0.38
EIF4A2-222	ENST00000492144	ABCB7	O75027	752 aa		12.64	□□□□□ -0.39
EIF4A2-222	ENST00000492144	SPDYE4	A6NLX3	237 aa		12.6	□□□□□ -0.39
EIF4A2-222	ENST00000492144	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.57	□□□□□ -0.4
EIF4A2-222	ENST00000492144	DSG3	P32926	999 aa		12.55	□□□□□ -0.4
EIF4A2-222	ENST00000492144	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.48	□□□□□ -0.41
EIF4A2-222	ENST00000492144	PROM2	Q8N271	834 aa		12.47	□□□□□ -0.41
EIF4A2-222	ENST00000492144	RTN4	Q9NQC3	1192 aa	Known RBP	12.46	□□□□□ -0.41
EIF4A2-222	ENST00000492144	CACNB1	Q02641	598 aa	Predicted RBP	12.43	□□□□□ -0.42
EIF4A2-222	ENST00000492144	FBXO3	Q9UK99	471 aa		12.4	□□□□□ -0.42
EIF4A2-222	ENST00000492144	OSCAR	Q8IYS5	282 aa		12.31	□□□□□ -0.44
EIF4A2-222	ENST00000492144	SPDYE2B	A6NHP3	402 aa		12.27	□□□□□ -0.45
EIF4A2-222	ENST00000492144	SPDYE6	P0CI01	402 aa		12.27	□□□□□ -0.45
EIF4A2-222	ENST00000492144	SPDYE2	Q495Y8	402 aa		12.27	□□□□□ -0.45
EIF4A2-222	ENST00000492144	ZNF692	Q9BU19	519 aa	Predicted RBP	12.27	□□□□□ -0.45
EIF4A2-222	ENST00000492144	VASP	P50552	380 aa	Predicted RBP	12.23	□□□□□ -0.45
EIF4A2-222	ENST00000492144	SSUH2	Q9Y2M2	353 aa		12.22	□□□□□ -0.45
EIF4A2-222	ENST00000492144	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
EIF4A2-222	ENST00000492144	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.1	□□□□□ -0.47
EIF4A2-222	ENST00000492144	STAG3	Q9UJ98	1225 aa		12.05	□□□□□ -0.48
EIF4A2-222	ENST00000492144	RBM42	Q9BTD8	480 aa	Known RBP	11.94	□□□□□ -0.5
EIF4A2-222	ENST00000492144	PLCD3	Q8N3E9	789 aa		11.93	□□□□□ -0.5
EIF4A2-222	ENST00000492144	KLHL34	Q8N239	644 aa		11.92	□□□□□ -0.5
EIF4A2-222	ENST00000492144	MIER1	Q8N108	512 aa		11.9	□□□□□ -0.5
EIF4A2-222	ENST00000492144	SPOCK2	Q92563	424 aa		11.89	□□□□□ -0.51
EIF4A2-222	ENST00000492144	AKT1S1	Q96B36	256 aa		11.88	□□□□□ -0.51
EIF4A2-222	ENST00000492144	SLC24A1	O60721	1099 aa		11.86	□□□□□ -0.51
EIF4A2-222	ENST00000492144	PKD2	Q13563	968 aa		11.84	□□□□□ -0.51
EIF4A2-222	ENST00000492144	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.81	□□□□□ -0.52
EIF4A2-222	ENST00000492144	PLEKHG5	O94827	1062 aa		11.8	□□□□□ -0.52
EIF4A2-222	ENST00000492144	REM2	Q8IYK8	340 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF4A2-222	ENST00000492144	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF4A2-222	ENST00000492144	CLEC11A	Q9Y240	323 aa		11.74	□□□□□ -0.53
EIF4A2-222	ENST00000492144	ECM2	O94769	699 aa	Predicted RBP	11.69	□□□□□ -0.54
EIF4A2-222	ENST00000492144	DCAF8L2	P0C7V8	631 aa		11.69	□□□□□ -0.54
EIF4A2-222	ENST00000492144	PRR29	P0C7W0	189 aa		11.68	□□□□□ -0.54
EIF4A2-222	ENST00000492144	CCDC180	Q9P1Z9	1646 aa		11.66	□□□□□ -0.54
EIF4A2-222	ENST00000492144	PITPNM1	O00562	1244 aa		11.64	□□□□□ -0.55
EIF4A2-222	ENST00000492144	CREBZF	Q9NS37	354 aa		11.64	□□□□□ -0.55
EIF4A2-222	ENST00000492144	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.63	□□□□□ -0.55
EIF4A2-222	ENST00000492144	NUBP1	P53384	320 aa		11.58	□□□□□ -0.56
EIF4A2-222	ENST00000492144	RGL2	O15211	777 aa		11.57	□□□□□ -0.56
EIF4A2-222	ENST00000492144	MNX1	P50219	401 aa	Predicted RBP	11.57	□□□□□ -0.56
EIF4A2-222	ENST00000492144	ABCC9	O60706	1549 aa		11.55	□□□□□ -0.56
EIF4A2-222	ENST00000492144	PLCB2	Q00722	1185 aa		11.54	□□□□□ -0.56
EIF4A2-222	ENST00000492144	GSE1	Q14687	1217 aa		11.54	□□□□□ -0.56
EIF4A2-222	ENST00000492144	TRIM41	Q8WV44	630 aa		11.54	□□□□□ -0.56
EIF4A2-222	ENST00000492144	DCAF8	Q5TAQ9	597 aa		11.49	□□□□□ -0.57
EIF4A2-222	ENST00000492144	NPM1	P06748	294 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
EIF4A2-222	ENST00000492144	FAM212A	Q96EL1	285 aa		11.46	□□□□□ -0.57
EIF4A2-222	ENST00000492144	BBX	Q8WY36	941 aa	Predicted RBP	11.45	□□□□□ -0.58
EIF4A2-222	ENST00000492144	RASEF	Q8IZ41	740 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms