RNA–Protein interactions for RNA: ENST00000375308.5

CDC16-205, Transcript of cell division cycle 16, humanhuman

TSL 1 (best) BASIC

Gene CDC16, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-205ENST00000375308 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
CDC16-205ENST00000375308 ABCC9O60706 1549 aa25.43■■□□□ 1.66
CDC16-205ENST00000375308 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
CDC16-205ENST00000375308 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
CDC16-205ENST00000375308 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
CDC16-205ENST00000375308 NACADO15069 1562 aa23.98■■□□□ 1.43
CDC16-205ENST00000375308 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
CDC16-205ENST00000375308 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
CDC16-205ENST00000375308 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
CDC16-205ENST00000375308 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
CDC16-205ENST00000375308 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
CDC16-205ENST00000375308 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.32
CDC16-205ENST00000375308 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
CDC16-205ENST00000375308 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
CDC16-205ENST00000375308 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
CDC16-205ENST00000375308 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
CDC16-205ENST00000375308 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
CDC16-205ENST00000375308 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
CDC16-205ENST00000375308 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
CDC16-205ENST00000375308 CUX2O14529 1486 aa22.29■■□□□ 1.16
CDC16-205ENST00000375308 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
CDC16-205ENST00000375308 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
CDC16-205ENST00000375308 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
CDC16-205ENST00000375308 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
CDC16-205ENST00000375308 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CDC16-205ENST00000375308 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
CDC16-205ENST00000375308 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
CDC16-205ENST00000375308 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
CDC16-205ENST00000375308 NESP48681 1621 aa21.68■■□□□ 1.06
CDC16-205ENST00000375308 LAMC3Q9Y6N6 1575 aa21.66■■□□□ 1.06
CDC16-205ENST00000375308 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
CDC16-205ENST00000375308 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
CDC16-205ENST00000375308 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
CDC16-205ENST00000375308 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
CDC16-205ENST00000375308 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
CDC16-205ENST00000375308 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
CDC16-205ENST00000375308 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CDC16-205ENST00000375308 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
CDC16-205ENST00000375308 WDR62O43379 1518 aa21.32■■□□□ 1
CDC16-205ENST00000375308 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
CDC16-205ENST00000375308 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
CDC16-205ENST00000375308 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
CDC16-205ENST00000375308 CFTRP13569 1480 aa21.09■□□□□ 0.97
CDC16-205ENST00000375308 WIZO95785 1651 aa21.01■□□□□ 0.95
CDC16-205ENST00000375308 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
CDC16-205ENST00000375308 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
CDC16-205ENST00000375308 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
CDC16-205ENST00000375308 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
CDC16-205ENST00000375308 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
CDC16-205ENST00000375308 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
CDC16-205ENST00000375308 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
CDC16-205ENST00000375308 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
CDC16-205ENST00000375308 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
CDC16-205ENST00000375308 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
CDC16-205ENST00000375308 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
CDC16-205ENST00000375308 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
CDC16-205ENST00000375308 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
CDC16-205ENST00000375308 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
CDC16-205ENST00000375308 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
CDC16-205ENST00000375308 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
CDC16-205ENST00000375308 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
CDC16-205ENST00000375308 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
CDC16-205ENST00000375308 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■■■ 38.5
CDC16-205ENST00000375308 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
CDC16-205ENST00000375308 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
CDC16-205ENST00000375308 FBLN2P98095 1184 aa20.43■□□□□ 0.86
CDC16-205ENST00000375308 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
CDC16-205ENST00000375308 CHD1O14646 1710 aa20.39■□□□□ 0.86
CDC16-205ENST00000375308 SOGA1O94964 1423 aa20.37■□□□□ 0.85
CDC16-205ENST00000375308 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.84
CDC16-205ENST00000375308 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
CDC16-205ENST00000375308 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
CDC16-205ENST00000375308 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
CDC16-205ENST00000375308 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
CDC16-205ENST00000375308 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
CDC16-205ENST00000375308 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
CDC16-205ENST00000375308 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
CDC16-205ENST00000375308 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
CDC16-205ENST00000375308 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
CDC16-205ENST00000375308 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
CDC16-205ENST00000375308 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
CDC16-205ENST00000375308 CUX1P39880 1505 aa20.11■□□□□ 0.81
CDC16-205ENST00000375308 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
CDC16-205ENST00000375308 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
CDC16-205ENST00000375308 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
CDC16-205ENST00000375308 GRIN2AQ12879 1464 aa19.95■□□□□ 0.78
CDC16-205ENST00000375308 NUP160Q12769 1436 aa19.95■□□□□ 0.78
CDC16-205ENST00000375308 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
CDC16-205ENST00000375308 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
CDC16-205ENST00000375308 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
CDC16-205ENST00000375308 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
CDC16-205ENST00000375308 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
CDC16-205ENST00000375308 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
CDC16-205ENST00000375308 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
CDC16-205ENST00000375308 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
CDC16-205ENST00000375308 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
CDC16-205ENST00000375308 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
CDC16-205ENST00000375308 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
CDC16-205ENST00000375308 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
CDC16-205ENST00000375308 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms