Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 AC135983.2-203ENST00000454486 1613 ntBASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHGA7Q9Y5G6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA7Q9Y5G6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHGA7Q9Y5G6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA7Q9Y5G6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA7Q9Y5G6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA7Q9Y5G6 AC127502.1-201ENST00000399971 1502 ntBASIC24.42■■□□□ 1.5
PCDHGA7Q9Y5G6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA7Q9Y5G6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PCDHGA7Q9Y5G6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 AC148477.6-201ENST00000623746 465 ntBASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 WHAMMP2-203ENST00000563942 1603 ntBASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 AL449106.1-201ENST00000608517 1980 ntBASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHGA7Q9Y5G6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
PCDHGA7Q9Y5G6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PCDHGA7Q9Y5G6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGA7Q9Y5G6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGA7Q9Y5G6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGA7Q9Y5G6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHGA7Q9Y5G6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PCDHGA7Q9Y5G6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGA7Q9Y5G6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHGA7Q9Y5G6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDHGA7Q9Y5G6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGA7Q9Y5G6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDHGA7Q9Y5G6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
PCDHGA7Q9Y5G6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA7Q9Y5G6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA7Q9Y5G6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 AC110285.7-201ENST00000624417 1536 ntBASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 AC060814.1-201ENST00000554326 538 ntBASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA7Q9Y5G6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHGA7Q9Y5G6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA7Q9Y5G6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA7Q9Y5G6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCDHGA7Q9Y5G6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHGA7Q9Y5G6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
PCDHGA7Q9Y5G6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGA7Q9Y5G6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PCDHGA7Q9Y5G6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHGA7Q9Y5G6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA7Q9Y5G6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
PCDHGA7Q9Y5G6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA7Q9Y5G6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHGA7Q9Y5G6 AC018358.1-201ENST00000631079 1402 ntBASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 U85056.1-201ENST00000616429 682 ntBASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA7Q9Y5G6 AC100797.4-201ENST00000631653 1827 ntBASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.28■■□□□ 1.48
PCDHGA7Q9Y5G6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA7Q9Y5G6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA7Q9Y5G6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA7Q9Y5G6 AL033527.3-201ENST00000566366 1196 ntBASIC24.27■■□□□ 1.48
PCDHGA7Q9Y5G6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA7Q9Y5G6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA7Q9Y5G6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA7Q9Y5G6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PCDHGA7Q9Y5G6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms