Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH18Q9HCL0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH18Q9HCL0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDH18Q9HCL0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH18Q9HCL0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDH18Q9HCL0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH18Q9HCL0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH18Q9HCL0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDH18Q9HCL0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH18Q9HCL0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH18Q9HCL0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH18Q9HCL0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.66■■□□□ 1.7
PCDH18Q9HCL0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH18Q9HCL0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PCDH18Q9HCL0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PCDH18Q9HCL0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH18Q9HCL0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH18Q9HCL0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDH18Q9HCL0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PCDH18Q9HCL0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH18Q9HCL0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH18Q9HCL0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDH18Q9HCL0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 AC142472.1-201ENST00000612013 1741 ntBASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH18Q9HCL0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH18Q9HCL0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH18Q9HCL0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH18Q9HCL0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH18Q9HCL0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDH18Q9HCL0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH18Q9HCL0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH18Q9HCL0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH18Q9HCL0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH18Q9HCL0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDH18Q9HCL0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.58■■□□□ 1.68
PCDH18Q9HCL0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH18Q9HCL0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDH18Q9HCL0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH18Q9HCL0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDH18Q9HCL0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH18Q9HCL0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
PCDH18Q9HCL0 AL359258.2-201ENST00000564063 1566 ntBASIC25.55■■□□□ 1.68
PCDH18Q9HCL0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH18Q9HCL0 MIR639-201ENST00000384974 98 ntBASIC25.53■■□□□ 1.68
PCDH18Q9HCL0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH18Q9HCL0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH18Q9HCL0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PCDH18Q9HCL0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDH18Q9HCL0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH18Q9HCL0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH18Q9HCL0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH18Q9HCL0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH18Q9HCL0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDH18Q9HCL0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDH18Q9HCL0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH18Q9HCL0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDH18Q9HCL0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH18Q9HCL0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH18Q9HCL0 AC091060.1-201ENST00000623524 1766 ntBASIC25.48■■□□□ 1.67
PCDH18Q9HCL0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms