Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-2Q9C056 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NKX6-2Q9C056 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-2Q9C056 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-2Q9C056 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-2Q9C056 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NKX6-2Q9C056 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-2Q9C056 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-2Q9C056 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-2Q9C056 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 ZNRF2P1-201ENST00000441407 443 ntBASIC19.9■□□□□ 0.78
NKX6-2Q9C056 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NKX6-2Q9C056 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-2Q9C056 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-2Q9C056 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-2Q9C056 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-2Q9C056 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-2Q9C056 DYNLL1-208ENST00000550178 581 ntBASIC19.89■□□□□ 0.77
NKX6-2Q9C056 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.88■□□□□ 0.77
NKX6-2Q9C056 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.87■□□□□ 0.77
NKX6-2Q9C056 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NKX6-2Q9C056 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NKX6-2Q9C056 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.87■□□□□ 0.77
NKX6-2Q9C056 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.87■□□□□ 0.77
NKX6-2Q9C056 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX6-2Q9C056 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 AP004833.2-201ENST00000532228 1454 ntBASIC19.85■□□□□ 0.77
NKX6-2Q9C056 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NKX6-2Q9C056 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX6-2Q9C056 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NKX6-2Q9C056 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX6-2Q9C056 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX6-2Q9C056 AC010864.1-201ENST00000609407 1511 ntBASIC19.83■□□□□ 0.77
NKX6-2Q9C056 WASH5P-204ENST00000632292 975 ntBASIC19.83■□□□□ 0.77
NKX6-2Q9C056 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NKX6-2Q9C056 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
NKX6-2Q9C056 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-2Q9C056 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-2Q9C056 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-2Q9C056 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX6-2Q9C056 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-2Q9C056 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NKX6-2Q9C056 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NKX6-2Q9C056 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-2Q9C056 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX6-2Q9C056 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NKX6-2Q9C056 AC092803.2-201ENST00000564287 1899 ntBASIC19.79■□□□□ 0.76
NKX6-2Q9C056 AL031258.1-201ENST00000623562 325 ntBASIC19.78■□□□□ 0.76
NKX6-2Q9C056 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NKX6-2Q9C056 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX6-2Q9C056 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-2Q9C056 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NKX6-2Q9C056 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms