Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSBP3Q9BWW4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSBP3Q9BWW4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSBP3Q9BWW4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.57■□□□□ 0.88
SSBP3Q9BWW4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSBP3Q9BWW4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.57■□□□□ 0.88
SSBP3Q9BWW4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 WHAMMP3-201ENST00000611636 1609 ntBASIC20.56■□□□□ 0.88
SSBP3Q9BWW4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 NTF6A-201ENST00000591175 560 ntBASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSBP3Q9BWW4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSBP3Q9BWW4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.54■□□□□ 0.88
SSBP3Q9BWW4 SMPD5-203ENST00000639008 1464 ntBASIC20.54■□□□□ 0.88
SSBP3Q9BWW4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSBP3Q9BWW4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSBP3Q9BWW4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSBP3Q9BWW4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.53■□□□□ 0.88
SSBP3Q9BWW4 LINC01003-201ENST00000564834 1764 ntBASIC20.53■□□□□ 0.88
SSBP3Q9BWW4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.53■□□□□ 0.88
SSBP3Q9BWW4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSBP3Q9BWW4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSBP3Q9BWW4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSBP3Q9BWW4 AC007029.1-201ENST00000604183 313 ntBASIC20.51■□□□□ 0.87
SSBP3Q9BWW4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSBP3Q9BWW4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.5■□□□□ 0.87
SSBP3Q9BWW4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSBP3Q9BWW4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 AC025884.2-201ENST00000553429 711 ntBASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSBP3Q9BWW4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSBP3Q9BWW4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSBP3Q9BWW4 U85056.1-201ENST00000616429 682 ntBASIC20.47■□□□□ 0.87
SSBP3Q9BWW4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSBP3Q9BWW4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSBP3Q9BWW4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 AC142086.6-201ENST00000621154 1765 ntBASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSBP3Q9BWW4 BX255925.1-201ENST00000566954 1854 ntBASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSBP3Q9BWW4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 MIR3960-201ENST00000583311 91 ntBASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSBP3Q9BWW4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 AL359504.2-201ENST00000605506 1601 ntBASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 RP9P-202ENST00000450133 1212 ntBASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 AC012354.3-201ENST00000623734 483 ntBASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SSBP3Q9BWW4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms