Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCC1Q96S66 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCC1Q96S66 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLCC1Q96S66 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCC1Q96S66 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCC1Q96S66 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CLCC1Q96S66 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCC1Q96S66 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCC1Q96S66 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.5■□□□□ 0.87
CLCC1Q96S66 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.49■□□□□ 0.87
CLCC1Q96S66 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLCC1Q96S66 LINC01003-201ENST00000564834 1764 ntBASIC20.49■□□□□ 0.87
CLCC1Q96S66 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCC1Q96S66 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCC1Q96S66 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCC1Q96S66 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCC1Q96S66 AC100797.4-201ENST00000631653 1827 ntBASIC20.48■□□□□ 0.87
CLCC1Q96S66 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCC1Q96S66 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCC1Q96S66 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCC1Q96S66 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CLCC1Q96S66 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCC1Q96S66 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLCC1Q96S66 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCC1Q96S66 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCC1Q96S66 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLCC1Q96S66 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLCC1Q96S66 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCC1Q96S66 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLCC1Q96S66 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLCC1Q96S66 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCC1Q96S66 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.87
CLCC1Q96S66 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCC1Q96S66 AC093323.1-202ENST00000635031 2045 ntBASIC20.45■□□□□ 0.86
CLCC1Q96S66 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCC1Q96S66 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCC1Q96S66 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCC1Q96S66 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCC1Q96S66 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCC1Q96S66 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCC1Q96S66 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCC1Q96S66 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLCC1Q96S66 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCC1Q96S66 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCC1Q96S66 DUX4L29-201ENST00000425409 679 ntBASIC20.44■□□□□ 0.86
CLCC1Q96S66 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCC1Q96S66 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCC1Q96S66 WHAMMP2-203ENST00000563942 1603 ntBASIC20.44■□□□□ 0.86
CLCC1Q96S66 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCC1Q96S66 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCC1Q96S66 AC135983.2-203ENST00000454486 1613 ntBASIC20.43■□□□□ 0.86
CLCC1Q96S66 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCC1Q96S66 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCC1Q96S66 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCC1Q96S66 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCC1Q96S66 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCC1Q96S66 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCC1Q96S66 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCC1Q96S66 AC021231.2-201ENST00000594613 730 ntBASIC20.42■□□□□ 0.86
CLCC1Q96S66 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCC1Q96S66 LINC00273-201ENST00000539813 1452 ntBASIC20.42■□□□□ 0.86
CLCC1Q96S66 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCC1Q96S66 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCC1Q96S66 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCC1Q96S66 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCC1Q96S66 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCC1Q96S66 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCC1Q96S66 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCC1Q96S66 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CLCC1Q96S66 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.39■□□□□ 0.86
CLCC1Q96S66 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.39■□□□□ 0.85
CLCC1Q96S66 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCC1Q96S66 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCC1Q96S66 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCC1Q96S66 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.39■□□□□ 0.85
CLCC1Q96S66 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CLCC1Q96S66 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCC1Q96S66 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCC1Q96S66 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCC1Q96S66 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCC1Q96S66 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.38■□□□□ 0.85
CLCC1Q96S66 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLCC1Q96S66 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCC1Q96S66 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCC1Q96S66 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.37■□□□□ 0.85
CLCC1Q96S66 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCC1Q96S66 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CLCC1Q96S66 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLCC1Q96S66 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCC1Q96S66 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCC1Q96S66 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCC1Q96S66 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCC1Q96S66 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCC1Q96S66 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCC1Q96S66 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCC1Q96S66 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCC1Q96S66 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCC1Q96S66 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCC1Q96S66 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCC1Q96S66 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms