Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.61■■□□□ 1.69
PRICKLE1Q96MT3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PRICKLE1Q96MT3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRICKLE1Q96MT3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRICKLE1Q96MT3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRICKLE1Q96MT3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRICKLE1Q96MT3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRICKLE1Q96MT3 ECEL1P2-201ENST00000461596 1295 ntBASIC25.59■■□□□ 1.69
PRICKLE1Q96MT3 ABHD17AP5-201ENST00000580133 923 ntBASIC25.59■■□□□ 1.69
PRICKLE1Q96MT3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PRICKLE1Q96MT3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRICKLE1Q96MT3 WHAMMP3-201ENST00000611636 1609 ntBASIC25.58■■□□□ 1.69
PRICKLE1Q96MT3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRICKLE1Q96MT3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 BX255925.1-201ENST00000566954 1854 ntBASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PRICKLE1Q96MT3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.55■■□□□ 1.68
PRICKLE1Q96MT3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRICKLE1Q96MT3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PRICKLE1Q96MT3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
PRICKLE1Q96MT3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRICKLE1Q96MT3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRICKLE1Q96MT3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRICKLE1Q96MT3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRICKLE1Q96MT3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRICKLE1Q96MT3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
PRICKLE1Q96MT3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRICKLE1Q96MT3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.53■■□□□ 1.68
PRICKLE1Q96MT3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRICKLE1Q96MT3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRICKLE1Q96MT3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRICKLE1Q96MT3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.51■■□□□ 1.67
PRICKLE1Q96MT3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
PRICKLE1Q96MT3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRICKLE1Q96MT3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PRICKLE1Q96MT3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
PRICKLE1Q96MT3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.5■■□□□ 1.67
PRICKLE1Q96MT3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
PRICKLE1Q96MT3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.49■■□□□ 1.67
PRICKLE1Q96MT3 AL449106.1-201ENST00000608517 1980 ntBASIC25.48■■□□□ 1.67
PRICKLE1Q96MT3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PRICKLE1Q96MT3 AC025884.2-201ENST00000553429 711 ntBASIC25.48■■□□□ 1.67
PRICKLE1Q96MT3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PRICKLE1Q96MT3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PRICKLE1Q96MT3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 AC007029.1-201ENST00000604183 313 ntBASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PRICKLE1Q96MT3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PRICKLE1Q96MT3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PRICKLE1Q96MT3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
PRICKLE1Q96MT3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PRICKLE1Q96MT3 SMPD5-203ENST00000639008 1464 ntBASIC25.45■■□□□ 1.66
PRICKLE1Q96MT3 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.44■■□□□ 1.66
PRICKLE1Q96MT3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.44■■□□□ 1.66
PRICKLE1Q96MT3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.44■■□□□ 1.66
PRICKLE1Q96MT3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PRICKLE1Q96MT3 AL359504.2-201ENST00000605506 1601 ntBASIC25.44■■□□□ 1.66
PRICKLE1Q96MT3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.43■■□□□ 1.66
PRICKLE1Q96MT3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PRICKLE1Q96MT3 U85056.1-201ENST00000616429 682 ntBASIC25.43■■□□□ 1.66
PRICKLE1Q96MT3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
PRICKLE1Q96MT3 NTF6A-201ENST00000591175 560 ntBASIC25.42■■□□□ 1.66
PRICKLE1Q96MT3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PRICKLE1Q96MT3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PRICKLE1Q96MT3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PRICKLE1Q96MT3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.41■■□□□ 1.66
PRICKLE1Q96MT3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PRICKLE1Q96MT3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRICKLE1Q96MT3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PRICKLE1Q96MT3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
PRICKLE1Q96MT3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms