Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KRT8P33-201ENST00000508125 1423 ntBASIC30.73■■■□□ 2.51
SNED1Q8TER0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNED1Q8TER0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.72■■■□□ 2.51
SNED1Q8TER0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNED1Q8TER0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SNED1Q8TER0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNED1Q8TER0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNED1Q8TER0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNED1Q8TER0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNED1Q8TER0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SNED1Q8TER0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNED1Q8TER0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.68■■■□□ 2.5
SNED1Q8TER0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.68■■■□□ 2.5
SNED1Q8TER0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNED1Q8TER0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNED1Q8TER0 MIR6765-201ENST00000614092 87 ntBASIC30.68■■■□□ 2.5
SNED1Q8TER0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.68■■■□□ 2.5
SNED1Q8TER0 GUSBP5-201ENST00000418136 578 ntBASIC30.67■■■□□ 2.5
SNED1Q8TER0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.67■■■□□ 2.5
SNED1Q8TER0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.67■■■□□ 2.5
SNED1Q8TER0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SNED1Q8TER0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNED1Q8TER0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNED1Q8TER0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SNED1Q8TER0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNED1Q8TER0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNED1Q8TER0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.65■■■□□ 2.5
SNED1Q8TER0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.65■■■□□ 2.5
SNED1Q8TER0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNED1Q8TER0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.65■■■□□ 2.5
SNED1Q8TER0 MIR3960-201ENST00000583311 91 ntBASIC30.65■■■□□ 2.5
SNED1Q8TER0 MIR4508-201ENST00000584178 70 ntBASIC30.65■■■□□ 2.5
SNED1Q8TER0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNED1Q8TER0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNED1Q8TER0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
SNED1Q8TER0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
SNED1Q8TER0 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.64■■■□□ 2.49
SNED1Q8TER0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNED1Q8TER0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNED1Q8TER0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
SNED1Q8TER0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.63■■■□□ 2.49
SNED1Q8TER0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
SNED1Q8TER0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNED1Q8TER0 AC019069.1-201ENST00000610008 1333 ntBASIC30.62■■■□□ 2.49
SNED1Q8TER0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
SNED1Q8TER0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SNED1Q8TER0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.62■■■□□ 2.49
SNED1Q8TER0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.62■■■□□ 2.49
SNED1Q8TER0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
SNED1Q8TER0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
SNED1Q8TER0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.61■■■□□ 2.49
SNED1Q8TER0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SNED1Q8TER0 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.61■■■□□ 2.49
SNED1Q8TER0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.6■■■□□ 2.49
SNED1Q8TER0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SNED1Q8TER0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
SNED1Q8TER0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.6■■■□□ 2.49
SNED1Q8TER0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.6■■■□□ 2.49
SNED1Q8TER0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SNED1Q8TER0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SNED1Q8TER0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SNED1Q8TER0 BHLHE23-202ENST00000612929 1109 ntBASIC30.59■■■□□ 2.49
SNED1Q8TER0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SNED1Q8TER0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SNED1Q8TER0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.58■■■□□ 2.49
SNED1Q8TER0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SNED1Q8TER0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SNED1Q8TER0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.57■■■□□ 2.48
SNED1Q8TER0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SNED1Q8TER0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNED1Q8TER0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNED1Q8TER0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 AC139795.1-202ENST00000500444 432 ntBASIC30.56■■■□□ 2.48
SNED1Q8TER0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.56■■■□□ 2.48
SNED1Q8TER0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
SNED1Q8TER0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.55■■■□□ 2.48
SNED1Q8TER0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SNED1Q8TER0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.54■■■□□ 2.48
SNED1Q8TER0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SNED1Q8TER0 AC103724.3-201ENST00000564481 992 ntBASIC30.54■■■□□ 2.48
SNED1Q8TER0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.54■■■□□ 2.48
SNED1Q8TER0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNED1Q8TER0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNED1Q8TER0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.53■■■□□ 2.48
SNED1Q8TER0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNED1Q8TER0 YBX1P4-201ENST00000392794 808 ntBASIC30.52■■■□□ 2.48
SNED1Q8TER0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
SNED1Q8TER0 THA1P-201ENST00000590384 1145 ntBASIC30.52■■■□□ 2.48
SNED1Q8TER0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SNED1Q8TER0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.51■■■□□ 2.47
SNED1Q8TER0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms