Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD6Q8TD26 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD6Q8TD26 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD6Q8TD26 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CHD6Q8TD26 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD6Q8TD26 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD6Q8TD26 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CHD6Q8TD26 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD6Q8TD26 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CHD6Q8TD26 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.21■■□□□ 1.31
CHD6Q8TD26 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.21■■□□□ 1.31
CHD6Q8TD26 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD6Q8TD26 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD6Q8TD26 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD6Q8TD26 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD6Q8TD26 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
CHD6Q8TD26 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD6Q8TD26 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.2■■□□□ 1.3
CHD6Q8TD26 WHAMMP2-203ENST00000563942 1603 ntBASIC23.19■■□□□ 1.3
CHD6Q8TD26 SUDS3P1-201ENST00000505831 966 ntBASIC23.19■■□□□ 1.3
CHD6Q8TD26 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CHD6Q8TD26 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHD6Q8TD26 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD6Q8TD26 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD6Q8TD26 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 AL162430.1-201ENST00000480705 870 ntBASIC23.17■■□□□ 1.3
CHD6Q8TD26 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 AC087623.3-201ENST00000607047 1098 ntBASIC23.17■■□□□ 1.3
CHD6Q8TD26 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.17■■□□□ 1.3
CHD6Q8TD26 MIR4466-201ENST00000606121 54 ntBASIC23.17■■□□□ 1.3
CHD6Q8TD26 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHD6Q8TD26 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD6Q8TD26 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD6Q8TD26 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.16■■□□□ 1.3
CHD6Q8TD26 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD6Q8TD26 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD6Q8TD26 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.15■■□□□ 1.3
CHD6Q8TD26 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CHD6Q8TD26 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.15■■□□□ 1.3
CHD6Q8TD26 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD6Q8TD26 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD6Q8TD26 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD6Q8TD26 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD6Q8TD26 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD6Q8TD26 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CHD6Q8TD26 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CHD6Q8TD26 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.13■■□□□ 1.29
CHD6Q8TD26 AC135983.2-203ENST00000454486 1613 ntBASIC23.13■■□□□ 1.29
CHD6Q8TD26 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD6Q8TD26 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CHD6Q8TD26 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD6Q8TD26 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD6Q8TD26 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD6Q8TD26 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
CHD6Q8TD26 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD6Q8TD26 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD6Q8TD26 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD6Q8TD26 MIR6821-201ENST00000617625 74 ntBASIC23.1■■□□□ 1.29
CHD6Q8TD26 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD6Q8TD26 BX664725.1-201ENST00000438252 379 ntBASIC23.1■■□□□ 1.29
CHD6Q8TD26 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD6Q8TD26 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD6Q8TD26 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD6Q8TD26 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CHD6Q8TD26 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD6Q8TD26 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.09■■□□□ 1.29
CHD6Q8TD26 AC019171.1-201ENST00000601251 1056 ntBASIC23.09■■□□□ 1.29
CHD6Q8TD26 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD6Q8TD26 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD6Q8TD26 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD6Q8TD26 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD6Q8TD26 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD6Q8TD26 RARRES2P11-201ENST00000635158 484 ntBASIC23.08■■□□□ 1.29
CHD6Q8TD26 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
CHD6Q8TD26 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD6Q8TD26 AC018755.3-202ENST00000596210 929 ntBASIC23.07■■□□□ 1.28
CHD6Q8TD26 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD6Q8TD26 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD6Q8TD26 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD6Q8TD26 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD6Q8TD26 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.06■■□□□ 1.28
CHD6Q8TD26 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD6Q8TD26 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD6Q8TD26 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD6Q8TD26 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD6Q8TD26 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD6Q8TD26 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHD6Q8TD26 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.04■■□□□ 1.28
CHD6Q8TD26 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CHD6Q8TD26 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD6Q8TD26 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD6Q8TD26 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.04■■□□□ 1.28
CHD6Q8TD26 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.03■■□□□ 1.28
CHD6Q8TD26 AC106739.1-201ENST00000617035 715 ntBASIC23.03■■□□□ 1.28
CHD6Q8TD26 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD6Q8TD26 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CHD6Q8TD26 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms