Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 WHAMMP2-203ENST00000563942 1603 ntBASIC24.1■■□□□ 1.45
CPSF7Q8N684 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CPSF7Q8N684 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CPSF7Q8N684 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.09■■□□□ 1.45
CPSF7Q8N684 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.09■■□□□ 1.45
CPSF7Q8N684 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPSF7Q8N684 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CPSF7Q8N684 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CPSF7Q8N684 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CPSF7Q8N684 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CPSF7Q8N684 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CPSF7Q8N684 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.07■■□□□ 1.44
CPSF7Q8N684 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPSF7Q8N684 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CPSF7Q8N684 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CPSF7Q8N684 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.06■■□□□ 1.44
CPSF7Q8N684 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPSF7Q8N684 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CPSF7Q8N684 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.05■■□□□ 1.44
CPSF7Q8N684 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.05■■□□□ 1.44
CPSF7Q8N684 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CPSF7Q8N684 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPSF7Q8N684 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPSF7Q8N684 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPSF7Q8N684 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPSF7Q8N684 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CPSF7Q8N684 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPSF7Q8N684 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CPSF7Q8N684 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CPSF7Q8N684 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CPSF7Q8N684 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.01■■□□□ 1.43
CPSF7Q8N684 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPSF7Q8N684 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.01■■□□□ 1.43
CPSF7Q8N684 AP004609.3-201ENST00000610705 1884 ntBASIC24.01■■□□□ 1.43
CPSF7Q8N684 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
CPSF7Q8N684 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CPSF7Q8N684 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CPSF7Q8N684 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.01■■□□□ 1.43
CPSF7Q8N684 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24■■□□□ 1.43
CPSF7Q8N684 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CPSF7Q8N684 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CPSF7Q8N684 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CPSF7Q8N684 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.99■■□□□ 1.43
CPSF7Q8N684 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.99■■□□□ 1.43
CPSF7Q8N684 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.99■■□□□ 1.43
CPSF7Q8N684 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPSF7Q8N684 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.98■■□□□ 1.43
CPSF7Q8N684 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPSF7Q8N684 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPSF7Q8N684 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPSF7Q8N684 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPSF7Q8N684 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPSF7Q8N684 LINC01971-201ENST00000617888 1048 ntBASIC23.97■■□□□ 1.43
CPSF7Q8N684 AC093323.1-202ENST00000635031 2045 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 LINC00273-201ENST00000539813 1452 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPSF7Q8N684 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.96■■□□□ 1.43
CPSF7Q8N684 DUX4L11-201ENST00000611504 1267 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 DUX4L12-201ENST00000614593 1267 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 DUX4L14-201ENST00000621227 1267 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPSF7Q8N684 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.96■■□□□ 1.43
CPSF7Q8N684 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CPSF7Q8N684 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CPSF7Q8N684 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.95■■□□□ 1.43
CPSF7Q8N684 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
CPSF7Q8N684 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPSF7Q8N684 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPSF7Q8N684 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPSF7Q8N684 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPSF7Q8N684 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CPSF7Q8N684 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.93■■□□□ 1.42
CPSF7Q8N684 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPSF7Q8N684 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.93■■□□□ 1.42
CPSF7Q8N684 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPSF7Q8N684 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPSF7Q8N684 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.92■■□□□ 1.42
CPSF7Q8N684 MIR3648-2-201ENST00000581792 180 ntBASIC23.92■■□□□ 1.42
CPSF7Q8N684 MIR3648-1-201ENST00000615959 180 ntBASIC23.92■■□□□ 1.42
CPSF7Q8N684 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.92■■□□□ 1.42
CPSF7Q8N684 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPSF7Q8N684 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPSF7Q8N684 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPSF7Q8N684 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPSF7Q8N684 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.91■■□□□ 1.42
CPSF7Q8N684 AC016575.1-201ENST00000607026 382 ntBASIC23.91■■□□□ 1.42
CPSF7Q8N684 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPSF7Q8N684 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms