Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PVT1_1.1-201ENST00000615125 194 ntBASIC15.55■□□□□ 0.08
VPS13BQ7Z7G8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 ABCB10P1-201ENST00000614297 2181 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC103724.3-201ENST00000564481 992 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AL139393.2-201ENST00000608721 2025 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.52■□□□□ 0.08
VPS13BQ7Z7G8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 MIR4508-201ENST00000584178 70 ntBASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 SMPD5-203ENST00000639008 1464 ntBASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 Z92544.1-202ENST00000571933 1220 ntBASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 MIR6765-201ENST00000614092 87 ntBASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 AL359258.2-201ENST00000564063 1566 ntBASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AC074183.2-201ENST00000623112 922 ntBASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms