Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.58■■□□□ 1.21
TUBA1AQ71U36 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
TUBA1AQ71U36 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TUBA1AQ71U36 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.58■■□□□ 1.21
TUBA1AQ71U36 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TUBA1AQ71U36 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.57■■□□□ 1.2
TUBA1AQ71U36 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TUBA1AQ71U36 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TUBA1AQ71U36 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TUBA1AQ71U36 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.56■■□□□ 1.2
TUBA1AQ71U36 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.56■■□□□ 1.2
TUBA1AQ71U36 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TUBA1AQ71U36 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 WHAMMP2-203ENST00000563942 1603 ntBASIC22.54■■□□□ 1.2
TUBA1AQ71U36 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TUBA1AQ71U36 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
TUBA1AQ71U36 AC135983.2-203ENST00000454486 1613 ntBASIC22.53■■□□□ 1.2
TUBA1AQ71U36 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBA1AQ71U36 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.52■■□□□ 1.2
TUBA1AQ71U36 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBA1AQ71U36 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBA1AQ71U36 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBA1AQ71U36 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 LINC01971-201ENST00000617888 1048 ntBASIC22.51■■□□□ 1.19
TUBA1AQ71U36 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TUBA1AQ71U36 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TUBA1AQ71U36 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBA1AQ71U36 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TUBA1AQ71U36 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBA1AQ71U36 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TUBA1AQ71U36 DUX4L11-201ENST00000611504 1267 ntBASIC22.49■■□□□ 1.19
TUBA1AQ71U36 DUX4L12-201ENST00000614593 1267 ntBASIC22.49■■□□□ 1.19
TUBA1AQ71U36 DUX4L14-201ENST00000621227 1267 ntBASIC22.49■■□□□ 1.19
TUBA1AQ71U36 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.49■■□□□ 1.19
TUBA1AQ71U36 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBA1AQ71U36 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TUBA1AQ71U36 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBA1AQ71U36 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBA1AQ71U36 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TUBA1AQ71U36 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TUBA1AQ71U36 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TUBA1AQ71U36 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TUBA1AQ71U36 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 DUSP8P4-201ENST00000399538 1761 ntBASIC22.45■■□□□ 1.18
TUBA1AQ71U36 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TUBA1AQ71U36 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TUBA1AQ71U36 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TUBA1AQ71U36 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TUBA1AQ71U36 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.44■■□□□ 1.18
TUBA1AQ71U36 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.43■■□□□ 1.18
TUBA1AQ71U36 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TUBA1AQ71U36 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TUBA1AQ71U36 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TUBA1AQ71U36 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TUBA1AQ71U36 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TUBA1AQ71U36 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms