Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.19□□□□□ -0.462e-21■■■■■ 32
LARP4Q71RC2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.462e-21■■■■■ 32
LARP4Q71RC2 MRPL33-203ENST00000448427 527 ntTSL 49.16□□□□□ -0.942e-21■■■■■ 32
LARP4Q71RC2 MRPL33-206ENST00000483992 729 ntTSL 26.73□□□□□ -1.332e-21■■■■■ 32
LARP4Q71RC2 MRPL33-205ENST00000476552 587 ntTSL 25.26□□□□□ -1.572e-21■■■■■ 32
LARP4Q71RC2 NDUFA5-205ENST00000467117 687 ntTSL 212.3□□□□□ -0.444e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC12.22□□□□□ -0.454e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC11.98□□□□□ -0.494e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.564e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-203ENST00000459880 599 ntTSL 29.5□□□□□ -0.894e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-204ENST00000466896 778 ntTSL 39.5□□□□□ -0.894e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-202ENST00000378795 1360 ntTSL 25.86□□□□□ -1.474e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.29□□□□□ -1.564e-6■■■■■ 31.9
LARP4Q71RC2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.87■□□□□ 0.454e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.35□□□□□ -0.274e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC8.04□□□□□ -1.124e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-206ENST00000448673 652 ntTSL 57.93□□□□□ -1.144e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-207ENST00000455663 687 ntTSL 36.5□□□□□ -1.374e-8■■■■■ 31.9
LARP4Q71RC2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.93□□□□□ -1.32e-7■■■■■ 31.8
LARP4Q71RC2 SNRPC-204ENST00000474635 511 ntTSL 57.87□□□□□ -1.151e-7■■■■■ 31.7
LARP4Q71RC2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.76■■□□□ 1.074e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.314e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.55■□□□□ 0.084e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.194e-9■■■■■ 31.7
LARP4Q71RC2 HMGN1-217ENST00000489072 1014 ntTSL 322.8■■□□□ 1.241e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-212ENST00000580322 1558 ntTSL 522.25■■□□□ 1.151e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-224ENST00000584557 2000 nt21.91■■□□□ 1.11e-8■■■■■ 31.7
LARP4Q71RC2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■■■■■ 31.7
LARP4Q71RC2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 318.33■□□□□ 0.521e-8■■■■■ 31.7
LARP4Q71RC2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.481e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-206ENST00000431390 1552 ntTSL 317.59■□□□□ 0.412e-12■■■■■ 31.7
LARP4Q71RC2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.291e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-207ENST00000436324 1045 ntTSL 216.73■□□□□ 0.271e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-207ENST00000488073 853 ntTSL 516.66■□□□□ 0.261e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.15■□□□□ 0.181e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.12e-12■■■■■ 31.7
LARP4Q71RC2 HMGN1-210ENST00000464078 508 ntTSL 515.58■□□□□ 0.081e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-201ENST00000293208 1272 ntTSL 515.55■□□□□ 0.081e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.52■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.49■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-217ENST00000582022 2409 ntTSL 1 (best)15.02□□□□□ -0.011e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 314.15□□□□□ -0.141e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.73□□□□□ -0.211e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-8■■■■■ 31.7
LARP4Q71RC2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.33□□□□□ -0.283e-16■■■■■ 31.7
LARP4Q71RC2 HMGN1-208ENST00000443046 823 ntTSL 312.91□□□□□ -0.341e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-216ENST00000486741 4299 ntTSL 212.89□□□□□ -0.352e-12■■■■■ 31.7
LARP4Q71RC2 SAP30BP-220ENST00000583329 998 ntTSL 312.57□□□□□ -0.41e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-214ENST00000580601 2786 ntTSL 212.48□□□□□ -0.411e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-220ENST00000492280 2707 ntTSL 512.39□□□□□ -0.432e-12■■■■■ 31.7
LARP4Q71RC2 SAP30BP-207ENST00000578756 652 ntTSL 211.66□□□□□ -0.541e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-209ENST00000579005 462 ntTSL 311.66□□□□□ -0.541e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-213ENST00000482192 793 ntTSL 310.86□□□□□ -0.671e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-203ENST00000542343 1011 ntTSL 29.78□□□□□ -0.841e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-215ENST00000485550 745 ntTSL 59.6□□□□□ -0.871e-8■■■■■ 31.7
LARP4Q71RC2 AL031729.1-201ENST00000433132 192 ntBASIC9.26□□□□□ -0.931e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC8.48□□□□□ -1.051e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-201ENST00000288344 1303 ntTSL 28.44□□□□□ -1.062e-12■■■■■ 31.7
LARP4Q71RC2 HMGN1-205ENST00000419378 850 ntTSL 26.54□□□□□ -1.361e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-218ENST00000490032 405 ntTSL 35.78□□□□□ -1.481e-8■■■■■ 31.7
LARP4Q71RC2 RPS21-203ENST00000370592 401 ntTSL 211.15□□□□□ -0.622e-34■■■■■ 31.6
LARP4Q71RC2 MINOS1-202ENST00000462646 335 ntTSL 317.03■□□□□ 0.321e-11■■■■■ 31.6
LARP4Q71RC2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.282e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.072e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.82e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)18.74■□□□□ 0.592e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.33■□□□□ 0.042e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-210ENST00000598325 1438 ntTSL 514.74□□□□□ -0.052e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-208ENST00000597730 327 ntTSL 214.09□□□□□ -0.152e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.22e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-218ENST00000601612 1480 ntTSL 212.56□□□□□ -0.42e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-216ENST00000601093 522 ntTSL 210.72□□□□□ -0.692e-16■■■■■ 31.5
LARP4Q71RC2 AC087633.2-204ENST00000621842 496 ntTSL 59.54□□□□□ -0.886e-6■■■■■ 31.5
LARP4Q71RC2 AC087633.2-205ENST00000615751 500 ntTSL 56.5□□□□□ -1.376e-6■■■■■ 31.5
LARP4Q71RC2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.562e-12■■■■■ 31.5
LARP4Q71RC2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.52e-12■■■■■ 31.5
LARP4Q71RC2 PTMS-204ENST00000540667 820 ntTSL 212.33□□□□□ -0.442e-12■■■■■ 31.5
LARP4Q71RC2 S100A6-203ENST00000462776 479 ntTSL 212.96□□□□□ -0.335e-7■■■■■ 31.5
LARP4Q71RC2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.233e-22■■■■■ 31.4
LARP4Q71RC2 MZT2B-207ENST00000485869 583 ntTSL 219.91■□□□□ 0.783e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.864e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-205ENST00000492540 1316 ntTSL 1 (best)17.48■□□□□ 0.394e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.87■□□□□ 0.134e-9■■■■■ 31.3
LARP4Q71RC2 MAMDC4-205ENST00000485732 4112 ntTSL 1 (best)13.73□□□□□ -0.211e-20■■■■■ 31.3
LARP4Q71RC2 PHPT1-203ENST00000462205 619 ntTSL 313.18□□□□□ -0.34e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-204ENST00000463215 627 ntTSL 213.08□□□□□ -0.321e-13■■■■■ 31.3
LARP4Q71RC2 PHPT1-206ENST00000497413 618 ntTSL 211.87□□□□□ -0.514e-9■■■■■ 31.3
LARP4Q71RC2 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC11.41□□□□□ -0.581e-34■■■■■ 31.3
LARP4Q71RC2 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.751e-34■■■■■ 31.3
LARP4Q71RC2 RPL9-211ENST00000514842 2153 ntTSL 511.83□□□□□ -0.522e-10■■■■■ 31.2
LARP4Q71RC2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.382e-10■■■■■ 31.2
LARP4Q71RC2 RPL9-208ENST00000508595 667 ntTSL 35.34□□□□□ -1.552e-10■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-209ENST00000532124 629 ntTSL 418.5■□□□□ 0.551e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-203ENST00000524770 565 ntTSL 318.5■□□□□ 0.551e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-206ENST00000530346 594 ntTSL 416.56■□□□□ 0.241e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.15■□□□□ 0.021e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-208ENST00000531092 744 ntTSL 311.57□□□□□ -0.561e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-214ENST00000534468 724 ntTSL 310.58□□□□□ -0.721e-6■■■■■ 31.2
Retrieved 100 of 15,922 protein–RNA pairs in 53 ms