RNA–Protein interactions for RNA: ENST00000425389.2

REPIN1-202, Transcript of replication initiator 1, humanhuman

APPRIS P3 BASIC

Gene REPIN1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-202ENST00000425389 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
REPIN1-202ENST00000425389 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
REPIN1-202ENST00000425389 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
REPIN1-202ENST00000425389 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
REPIN1-202ENST00000425389 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
REPIN1-202ENST00000425389 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
REPIN1-202ENST00000425389 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
REPIN1-202ENST00000425389 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
REPIN1-202ENST00000425389 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
REPIN1-202ENST00000425389 ABCC9O60706 1549 aa27.07■■□□□ 1.92
REPIN1-202ENST00000425389 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
REPIN1-202ENST00000425389 HRCP23327 699 aa26.62■■□□□ 1.85
REPIN1-202ENST00000425389 LOC105371045A0A1W2PR82 267 aa26.49■■□□□ 1.83
REPIN1-202ENST00000425389 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
REPIN1-202ENST00000425389 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
REPIN1-202ENST00000425389 NACADO15069 1562 aa26.29■■□□□ 1.8
REPIN1-202ENST00000425389 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
REPIN1-202ENST00000425389 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
REPIN1-202ENST00000425389 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
REPIN1-202ENST00000425389 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
REPIN1-202ENST00000425389 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
REPIN1-202ENST00000425389 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
REPIN1-202ENST00000425389 TRIM26Q12899 539 aaPredicted RBP25.89■■□□□ 1.73
REPIN1-202ENST00000425389 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
REPIN1-202ENST00000425389 WIZO95785 1651 aa25.82■■□□□ 1.72
REPIN1-202ENST00000425389 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
REPIN1-202ENST00000425389 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
REPIN1-202ENST00000425389 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
REPIN1-202ENST00000425389 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
REPIN1-202ENST00000425389 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
REPIN1-202ENST00000425389 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
REPIN1-202ENST00000425389 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
REPIN1-202ENST00000425389 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
REPIN1-202ENST00000425389 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
REPIN1-202ENST00000425389 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
REPIN1-202ENST00000425389 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
REPIN1-202ENST00000425389 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
REPIN1-202ENST00000425389 SOGA1O94964 1423 aa25.06■■□□□ 1.6
REPIN1-202ENST00000425389 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
REPIN1-202ENST00000425389 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
REPIN1-202ENST00000425389 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
REPIN1-202ENST00000425389 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
REPIN1-202ENST00000425389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
REPIN1-202ENST00000425389 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
REPIN1-202ENST00000425389 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
REPIN1-202ENST00000425389 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
REPIN1-202ENST00000425389 CCER1Q8TC90 406 aaPredicted RBP24.85■■□□□ 1.57
REPIN1-202ENST00000425389 EEA1Q15075 1411 aa24.84■■□□□ 1.57
REPIN1-202ENST00000425389 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.577e-10■■■■■ 33.4
REPIN1-202ENST00000425389 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
REPIN1-202ENST00000425389 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
REPIN1-202ENST00000425389 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
REPIN1-202ENST00000425389 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
REPIN1-202ENST00000425389 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
REPIN1-202ENST00000425389 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
REPIN1-202ENST00000425389 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
REPIN1-202ENST00000425389 RANGAP1P46060 587 aaPredicted RBP24.5■■□□□ 1.51
REPIN1-202ENST00000425389 KIF21BO75037 1637 aa24.5■■□□□ 1.51
REPIN1-202ENST00000425389 CLIP1P30622 1438 aa24.47■■□□□ 1.51
REPIN1-202ENST00000425389 NEUROD1Q13562 356 aa24.47■■□□□ 1.51
REPIN1-202ENST00000425389 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
REPIN1-202ENST00000425389 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
REPIN1-202ENST00000425389 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
REPIN1-202ENST00000425389 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
REPIN1-202ENST00000425389 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
REPIN1-202ENST00000425389 APLP2Q06481 763 aa24.33■■□□□ 1.49
REPIN1-202ENST00000425389 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
REPIN1-202ENST00000425389 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
REPIN1-202ENST00000425389 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
REPIN1-202ENST00000425389 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
REPIN1-202ENST00000425389 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
REPIN1-202ENST00000425389 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
REPIN1-202ENST00000425389 CUX1P39880 1505 aa24.15■■□□□ 1.46
REPIN1-202ENST00000425389 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.46
REPIN1-202ENST00000425389 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
REPIN1-202ENST00000425389 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
REPIN1-202ENST00000425389 MYT1Q01538 1121 aa24.07■■□□□ 1.44
REPIN1-202ENST00000425389 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
REPIN1-202ENST00000425389 CFTRP13569 1480 aa24.05■■□□□ 1.44
REPIN1-202ENST00000425389 ARAP1Q96P48 1450 aa24.05■■□□□ 1.44
REPIN1-202ENST00000425389 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
REPIN1-202ENST00000425389 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
REPIN1-202ENST00000425389 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
REPIN1-202ENST00000425389 CUX2O14529 1486 aa23.86■■□□□ 1.41
REPIN1-202ENST00000425389 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
REPIN1-202ENST00000425389 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
REPIN1-202ENST00000425389 MIER1Q8N108 512 aa23.83■■□□□ 1.41
REPIN1-202ENST00000425389 IGF1RP08069 1367 aa23.81■■□□□ 1.4
REPIN1-202ENST00000425389 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
REPIN1-202ENST00000425389 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
REPIN1-202ENST00000425389 NESP48681 1621 aa23.78■■□□□ 1.4
REPIN1-202ENST00000425389 ITGAEP38570 1179 aa23.77■■□□□ 1.4
REPIN1-202ENST00000425389 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
REPIN1-202ENST00000425389 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
REPIN1-202ENST00000425389 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
REPIN1-202ENST00000425389 CCNB3Q8WWL7 1395 aa23.7■■□□□ 1.39
REPIN1-202ENST00000425389 CLSPNQ9HAW4 1339 aa23.7■■□□□ 1.38
REPIN1-202ENST00000425389 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
REPIN1-202ENST00000425389 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
REPIN1-202ENST00000425389 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms