Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 AP006261.1-201ENST00000584783 668 ntBASIC20.99■□□□□ 0.95
LIN54Q6MZP7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LIN54Q6MZP7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.98■□□□□ 0.95
LIN54Q6MZP7 MIR3665-201ENST00000578708 105 ntBASIC20.98■□□□□ 0.95
LIN54Q6MZP7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIN54Q6MZP7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.98■□□□□ 0.95
LIN54Q6MZP7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LIN54Q6MZP7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIN54Q6MZP7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN54Q6MZP7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.97■□□□□ 0.95
LIN54Q6MZP7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIN54Q6MZP7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
LIN54Q6MZP7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN54Q6MZP7 AC127502.1-201ENST00000399971 1502 ntBASIC20.96■□□□□ 0.95
LIN54Q6MZP7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN54Q6MZP7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN54Q6MZP7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN54Q6MZP7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIN54Q6MZP7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
LIN54Q6MZP7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIN54Q6MZP7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LIN54Q6MZP7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIN54Q6MZP7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIN54Q6MZP7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LIN54Q6MZP7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LIN54Q6MZP7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LIN54Q6MZP7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LIN54Q6MZP7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LIN54Q6MZP7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LIN54Q6MZP7 DUX4L28-201ENST00000623687 678 ntBASIC20.91■□□□□ 0.94
LIN54Q6MZP7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LIN54Q6MZP7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LIN54Q6MZP7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LIN54Q6MZP7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
LIN54Q6MZP7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.89■□□□□ 0.94
LIN54Q6MZP7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
LIN54Q6MZP7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN54Q6MZP7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
LIN54Q6MZP7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIN54Q6MZP7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.89■□□□□ 0.93
LIN54Q6MZP7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.88■□□□□ 0.93
LIN54Q6MZP7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIN54Q6MZP7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIN54Q6MZP7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIN54Q6MZP7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIN54Q6MZP7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LIN54Q6MZP7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIN54Q6MZP7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LIN54Q6MZP7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.87■□□□□ 0.93
LIN54Q6MZP7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.86■□□□□ 0.93
LIN54Q6MZP7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN54Q6MZP7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 AP002414.2-202ENST00000590929 1450 ntBASIC20.85■□□□□ 0.93
LIN54Q6MZP7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.85■□□□□ 0.93
LIN54Q6MZP7 AL162393.1-201ENST00000437852 946 ntBASIC20.84■□□□□ 0.93
LIN54Q6MZP7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LIN54Q6MZP7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIN54Q6MZP7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LIN54Q6MZP7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIN54Q6MZP7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIN54Q6MZP7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIN54Q6MZP7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIN54Q6MZP7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LIN54Q6MZP7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LIN54Q6MZP7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.82■□□□□ 0.92
LIN54Q6MZP7 AC108673.1-201ENST00000510422 1159 ntBASIC20.82■□□□□ 0.92
LIN54Q6MZP7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms