Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 AC142472.1-201ENST00000612013 1741 ntBASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00242Q5T6M2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00242Q5T6M2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00242Q5T6M2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00242Q5T6M2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00242Q5T6M2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00242Q5T6M2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00242Q5T6M2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00242Q5T6M2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LINC00242Q5T6M2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00242Q5T6M2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00242Q5T6M2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00242Q5T6M2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00242Q5T6M2 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LINC00242Q5T6M2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00242Q5T6M2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00242Q5T6M2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 SUZ12P1-203ENST00000578195 985 ntBASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 WHAMMP3-201ENST00000611636 1609 ntBASIC16.78■□□□□ 0.28
LINC00242Q5T6M2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00242Q5T6M2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00242Q5T6M2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00242Q5T6M2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
LINC00242Q5T6M2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LINC00242Q5T6M2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00242Q5T6M2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
LINC00242Q5T6M2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00242Q5T6M2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00242Q5T6M2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 ERN1-208ENST00000606895 2068 ntBASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 AC110285.7-201ENST00000624417 1536 ntBASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00242Q5T6M2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00242Q5T6M2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LINC00242Q5T6M2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms