Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 AC148477.6-201ENST00000623746 465 ntBASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.48■■□□□ 1.03
SNAI3Q3KNW1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.47■■□□□ 1.03
SNAI3Q3KNW1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.47■■□□□ 1.03
SNAI3Q3KNW1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNAI3Q3KNW1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.46■■□□□ 1.03
SNAI3Q3KNW1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.46■■□□□ 1.03
SNAI3Q3KNW1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAI3Q3KNW1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAI3Q3KNW1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAI3Q3KNW1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SNAI3Q3KNW1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 AC016575.1-201ENST00000607026 382 ntBASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 MIR7108-201ENST00000614319 87 ntBASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNAI3Q3KNW1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.44■■□□□ 1.02
SNAI3Q3KNW1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNAI3Q3KNW1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNAI3Q3KNW1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNAI3Q3KNW1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNAI3Q3KNW1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.43■■□□□ 1.02
SNAI3Q3KNW1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNAI3Q3KNW1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.42■■□□□ 1.02
SNAI3Q3KNW1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SNAI3Q3KNW1 AC142472.1-201ENST00000612013 1741 ntBASIC21.42■■□□□ 1.02
SNAI3Q3KNW1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNAI3Q3KNW1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNAI3Q3KNW1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
SNAI3Q3KNW1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.41■■□□□ 1.02
SNAI3Q3KNW1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNAI3Q3KNW1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SNAI3Q3KNW1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SNAI3Q3KNW1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.39■■□□□ 1.02
SNAI3Q3KNW1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNAI3Q3KNW1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNAI3Q3KNW1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.39■■□□□ 1.01
SNAI3Q3KNW1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNAI3Q3KNW1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SNAI3Q3KNW1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNAI3Q3KNW1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNAI3Q3KNW1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SNAI3Q3KNW1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 AC091060.1-201ENST00000623524 1766 ntBASIC21.36■■□□□ 1.01
SNAI3Q3KNW1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNAI3Q3KNW1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNAI3Q3KNW1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.34■■□□□ 1.01
SNAI3Q3KNW1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.34■■□□□ 1.01
SNAI3Q3KNW1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNAI3Q3KNW1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNAI3Q3KNW1 AL359258.2-201ENST00000564063 1566 ntBASIC21.33■■□□□ 1.01
SNAI3Q3KNW1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNAI3Q3KNW1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.33■■□□□ 1
SNAI3Q3KNW1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.33■■□□□ 1
SNAI3Q3KNW1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNAI3Q3KNW1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.32■■□□□ 1
SNAI3Q3KNW1 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.32■■□□□ 1
SNAI3Q3KNW1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms