Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RSPO1Q2MKA7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 MIR7108-201ENST00000614319 87 ntBASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO1Q2MKA7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RSPO1Q2MKA7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RSPO1Q2MKA7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO1Q2MKA7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO1Q2MKA7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO1Q2MKA7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO1Q2MKA7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.55■■□□□ 1.04
RSPO1Q2MKA7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO1Q2MKA7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
RSPO1Q2MKA7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.53■■□□□ 1.04
RSPO1Q2MKA7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.53■■□□□ 1.04
RSPO1Q2MKA7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.53■■□□□ 1.04
RSPO1Q2MKA7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO1Q2MKA7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.52■■□□□ 1.04
RSPO1Q2MKA7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RSPO1Q2MKA7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.52■■□□□ 1.04
RSPO1Q2MKA7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.52■■□□□ 1.04
RSPO1Q2MKA7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO1Q2MKA7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RSPO1Q2MKA7 AC142472.1-201ENST00000612013 1741 ntBASIC21.52■■□□□ 1.03
RSPO1Q2MKA7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.51■■□□□ 1.03
RSPO1Q2MKA7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.51■■□□□ 1.03
RSPO1Q2MKA7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO1Q2MKA7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO1Q2MKA7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO1Q2MKA7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.5■■□□□ 1.03
RSPO1Q2MKA7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
RSPO1Q2MKA7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.5■■□□□ 1.03
RSPO1Q2MKA7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RSPO1Q2MKA7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RSPO1Q2MKA7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RSPO1Q2MKA7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RSPO1Q2MKA7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.49■■□□□ 1.03
RSPO1Q2MKA7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.49■■□□□ 1.03
RSPO1Q2MKA7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RSPO1Q2MKA7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO1Q2MKA7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RSPO1Q2MKA7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.46■■□□□ 1.03
RSPO1Q2MKA7 AC091060.1-201ENST00000623524 1766 ntBASIC21.46■■□□□ 1.03
RSPO1Q2MKA7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RSPO1Q2MKA7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RSPO1Q2MKA7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RSPO1Q2MKA7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RSPO1Q2MKA7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.45■■□□□ 1.02
RSPO1Q2MKA7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.45■■□□□ 1.02
RSPO1Q2MKA7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RSPO1Q2MKA7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RSPO1Q2MKA7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RSPO1Q2MKA7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.44■■□□□ 1.02
RSPO1Q2MKA7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.44■■□□□ 1.02
RSPO1Q2MKA7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 AL359258.2-201ENST00000564063 1566 ntBASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO1Q2MKA7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO1Q2MKA7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.42■■□□□ 1.02
RSPO1Q2MKA7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.42■■□□□ 1.02
RSPO1Q2MKA7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO1Q2MKA7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO1Q2MKA7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO1Q2MKA7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 1469.4 ms