Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CSF1P09603 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CSF1P09603 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CSF1P09603 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.2■□□□□ 0.98
CSF1P09603 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.2■□□□□ 0.98
CSF1P09603 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CSF1P09603 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.2■□□□□ 0.98
CSF1P09603 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSF1P09603 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.19■□□□□ 0.98
CSF1P09603 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSF1P09603 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSF1P09603 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.19■□□□□ 0.98
CSF1P09603 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CSF1P09603 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.17■□□□□ 0.98
CSF1P09603 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.17■□□□□ 0.98
CSF1P09603 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.17■□□□□ 0.98
CSF1P09603 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSF1P09603 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSF1P09603 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSF1P09603 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.15■□□□□ 0.98
CSF1P09603 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSF1P09603 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSF1P09603 ZNRF2P2-203ENST00000454624 420 ntBASIC21.14■□□□□ 0.97
CSF1P09603 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CSF1P09603 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CSF1P09603 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.13■□□□□ 0.97
CSF1P09603 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSF1P09603 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1P09603 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1P09603 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CSF1P09603 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSF1P09603 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 AP004609.3-201ENST00000610705 1884 ntBASIC21.09■□□□□ 0.97
CSF1P09603 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.08■□□□□ 0.97
CSF1P09603 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSF1P09603 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.07■□□□□ 0.96
CSF1P09603 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
CSF1P09603 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.06■□□□□ 0.96
CSF1P09603 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CSF1P09603 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CSF1P09603 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 306.9 ms