Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CSF1P09603 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSF1P09603 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CSF1P09603 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CSF1P09603 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.2■□□□□ 0.98
CSF1P09603 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.2■□□□□ 0.98
CSF1P09603 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSF1P09603 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CSF1P09603 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.2■□□□□ 0.98
CSF1P09603 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSF1P09603 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.19■□□□□ 0.98
CSF1P09603 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSF1P09603 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSF1P09603 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.19■□□□□ 0.98
CSF1P09603 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSF1P09603 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CSF1P09603 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSF1P09603 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.17■□□□□ 0.98
CSF1P09603 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.17■□□□□ 0.98
CSF1P09603 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.17■□□□□ 0.98
CSF1P09603 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSF1P09603 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSF1P09603 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSF1P09603 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSF1P09603 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.15■□□□□ 0.98
CSF1P09603 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSF1P09603 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSF1P09603 ZNRF2P2-203ENST00000454624 420 ntBASIC21.14■□□□□ 0.97
CSF1P09603 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CSF1P09603 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CSF1P09603 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.13■□□□□ 0.97
CSF1P09603 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSF1P09603 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CSF1P09603 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1P09603 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1P09603 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CSF1P09603 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSF1P09603 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1P09603 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1P09603 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1P09603 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1P09603 AP004609.3-201ENST00000610705 1884 ntBASIC21.09■□□□□ 0.97
CSF1P09603 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.08■□□□□ 0.97
CSF1P09603 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1P09603 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSF1P09603 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.07■□□□□ 0.96
CSF1P09603 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSF1P09603 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
CSF1P09603 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.06■□□□□ 0.96
CSF1P09603 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CSF1P09603 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CSF1P09603 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSF1P09603 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSF1P09603 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSF1P09603 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CSF1P09603 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms