Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPLP0P05388 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPLP0P05388 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
RPLP0P05388 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPLP0P05388 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPLP0P05388 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPLP0P05388 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.16■■□□□ 1.46
RPLP0P05388 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.16■■□□□ 1.46
RPLP0P05388 SMPD5-203ENST00000639008 1464 ntBASIC24.15■■□□□ 1.46
RPLP0P05388 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.15■■□□□ 1.46
RPLP0P05388 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
RPLP0P05388 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPLP0P05388 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.14■■□□□ 1.45
RPLP0P05388 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.14■■□□□ 1.45
RPLP0P05388 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.14■■□□□ 1.45
RPLP0P05388 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
RPLP0P05388 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 AC133552.2-201ENST00000619106 1032 ntBASIC24.13■■□□□ 1.45
RPLP0P05388 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.13■■□□□ 1.45
RPLP0P05388 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPLP0P05388 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.12■■□□□ 1.45
RPLP0P05388 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPLP0P05388 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RPLP0P05388 AC009831.1-201ENST00000580420 1582 ntBASIC24.12■■□□□ 1.45
RPLP0P05388 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPLP0P05388 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPLP0P05388 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.11■■□□□ 1.45
RPLP0P05388 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPLP0P05388 AL592293.1-201ENST00000502889 1188 ntBASIC24.11■■□□□ 1.45
RPLP0P05388 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RPLP0P05388 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.11■■□□□ 1.45
RPLP0P05388 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RPLP0P05388 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
RPLP0P05388 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.1■■□□□ 1.45
RPLP0P05388 AC129492.7-201ENST00000622992 756 ntBASIC24.1■■□□□ 1.45
RPLP0P05388 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RPLP0P05388 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RPLP0P05388 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RPLP0P05388 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.1■■□□□ 1.45
RPLP0P05388 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RPLP0P05388 AC142086.6-201ENST00000621154 1765 ntBASIC24.09■■□□□ 1.45
RPLP0P05388 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RPLP0P05388 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RPLP0P05388 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RPLP0P05388 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RPLP0P05388 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RPLP0P05388 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPLP0P05388 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPLP0P05388 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RPLP0P05388 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.07■■□□□ 1.44
RPLP0P05388 DUX4L18-201ENST00000553347 1267 ntBASIC24.07■■□□□ 1.44
RPLP0P05388 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RPLP0P05388 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.07■■□□□ 1.44
RPLP0P05388 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPLP0P05388 AP002414.2-202ENST00000590929 1450 ntBASIC24.07■■□□□ 1.44
RPLP0P05388 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RPLP0P05388 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.06■■□□□ 1.44
RPLP0P05388 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RPLP0P05388 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RPLP0P05388 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RPLP0P05388 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RPLP0P05388 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RPLP0P05388 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RPLP0P05388 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RPLP0P05388 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RPLP0P05388 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.05■■□□□ 1.44
RPLP0P05388 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.04■■□□□ 1.44
RPLP0P05388 AC025884.2-201ENST00000553429 711 ntBASIC24.04■■□□□ 1.44
RPLP0P05388 AC026202.3-201ENST00000600805 1127 ntBASIC24.04■■□□□ 1.44
RPLP0P05388 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RPLP0P05388 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RPLP0P05388 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RPLP0P05388 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RPLP0P05388 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.03■■□□□ 1.44
RPLP0P05388 RARRES2P1-201ENST00000474487 481 ntBASIC24.03■■□□□ 1.44
RPLP0P05388 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.03■■□□□ 1.44
RPLP0P05388 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RPLP0P05388 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RPLP0P05388 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPLP0P05388 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPLP0P05388 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RPLP0P05388 RP9P-202ENST00000450133 1212 ntBASIC24.01■■□□□ 1.43
RPLP0P05388 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.01■■□□□ 1.43
RPLP0P05388 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.01■■□□□ 1.43
RPLP0P05388 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.01■■□□□ 1.43
RPLP0P05388 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPLP0P05388 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPLP0P05388 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24■■□□□ 1.43
RPLP0P05388 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24■■□□□ 1.43
RPLP0P05388 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24■■□□□ 1.43
RPLP0P05388 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPLP0P05388 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24■■□□□ 1.43
RPLP0P05388 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPLP0P05388 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPLP0P05388 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms