Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRDV1A0A1B0GX56 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRDV1A0A1B0GX56 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRDV1A0A1B0GX56 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRDV1A0A1B0GX56 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRDV1A0A1B0GX56 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
TRDV1A0A1B0GX56 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRDV1A0A1B0GX56 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRDV1A0A1B0GX56 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRDV1A0A1B0GX56 RARRES2P7-201ENST00000567349 469 ntBASIC21.71■■□□□ 1.07
TRDV1A0A1B0GX56 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 AC142381.3-201ENST00000568208 1670 ntBASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRDV1A0A1B0GX56 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRDV1A0A1B0GX56 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.68■■□□□ 1.06
TRDV1A0A1B0GX56 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRDV1A0A1B0GX56 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRDV1A0A1B0GX56 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRDV1A0A1B0GX56 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRDV1A0A1B0GX56 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRDV1A0A1B0GX56 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRDV1A0A1B0GX56 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRDV1A0A1B0GX56 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRDV1A0A1B0GX56 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.65■■□□□ 1.06
TRDV1A0A1B0GX56 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
TRDV1A0A1B0GX56 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRDV1A0A1B0GX56 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TRDV1A0A1B0GX56 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRDV1A0A1B0GX56 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRDV1A0A1B0GX56 AC010501.1-201ENST00000606270 1962 ntBASIC21.64■■□□□ 1.05
TRDV1A0A1B0GX56 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRDV1A0A1B0GX56 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRDV1A0A1B0GX56 CAHM-201ENST00000604200 896 ntBASIC21.63■■□□□ 1.05
TRDV1A0A1B0GX56 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.63■■□□□ 1.05
TRDV1A0A1B0GX56 LINC00273-201ENST00000539813 1452 ntBASIC21.63■■□□□ 1.05
TRDV1A0A1B0GX56 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRDV1A0A1B0GX56 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRDV1A0A1B0GX56 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRDV1A0A1B0GX56 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRDV1A0A1B0GX56 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.62■■□□□ 1.05
TRDV1A0A1B0GX56 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.62■■□□□ 1.05
TRDV1A0A1B0GX56 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRDV1A0A1B0GX56 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRDV1A0A1B0GX56 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRDV1A0A1B0GX56 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 AL139125.2-201ENST00000623134 1869 ntBASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRDV1A0A1B0GX56 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRDV1A0A1B0GX56 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRDV1A0A1B0GX56 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.58■■□□□ 1.05
TRDV1A0A1B0GX56 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.58■■□□□ 1.05
TRDV1A0A1B0GX56 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms